Gene Information

Name : SF2501a (SF2501a)
Accession : YP_008439270.1
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : Insertion element iso-IS1N protein insA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2560833 - 2561105 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence : 
ATGACCAGCGTTAATATTCATTGTCCCCGTTGTCAGTCAGCTCAGGTTTACCGCCATGGTCAGAACCCTAAAGGCCGTGA
CAGACTTCGCTGCCGTGACTGCCACCGTGTGTTTCAGTTCACTTATACTTATCAAGCACGTAAGCCGGGTATGAAAGAGC
TGATAACTGAAATGGCCTTTAATGGTGCCGGGGTTCGCGATACCGCCAGGACACTGAAAATTGGTAGTAACACCGTCATC
CGGACTTTAAAAAACTCGCGCCAAAGCGAATAA

Protein sequence : 
MTSVNIHCPRCQSAQVYRHGQNPKGRDRLRCRDCHRVFQFTYTYQARKPGMKELITEMAFNGAGVRDTARTLKIGSNTVI
RTLKNSRQSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 1e-16 60
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 9e-17 60
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 6e-14 44
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 6e-14 44
insA AEZ06026.1 InsA Not tested AbaR24 Protein 6e-14 44
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 9e-14 44
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 9e-14 44
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 9e-14 44
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 3e-14 43
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 3e-14 43
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 6e-14 42
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 5e-14 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SF2501a YP_008439270.1 Insertion element iso-IS1N protein insA VFG1690 Protein 4e-17 60