Gene Information

Name : SF1370 (SF1370)
Accession : NP_707266.2
Strain : Shigella flexneri 301
Genome accession: NC_004337
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1411037 - 1411657 bp
Length : 621 bp
Strand : -
Note : Code: L; COG: COG2801

DNA sequence :
ATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGG
CGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGAACAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGC
GGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTGGGGTGGCGGGTCTCATCGTCCATGGAA
ACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGG
TTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACT
CGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGT
GCAGAAGTGGAACTGGCCACACTCACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCACATCCC
TCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
MAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPEQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSME
TTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR
AEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 1e-90 99
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-90 99
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 8e-90 99
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 3e-89 98
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 1e-70 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SF1370 NP_707266.2 IS629 ORF2 VFG1715 Protein 3e-71 92