|
Name : serS (BR0885) Accession : NP_697898.1 Strain : Genome accession: NC_004310 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 857683 - 858966 bp Length : 1284 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACATCAAATGGATTCGCGAAAACCCGGAAACCCTCGACAAGGCGCTCGCAAAGCGTGGGGCTGCTCCGCTTTC GTCCGAACTGATTGCGCTGGATGAAAAGCGCCGCGAGCATGTCGGCAAGGTGCAGGCAGCGCAGGAGCGCCGCAATGCCG CCTCGAAGGAAATCGGCAAGGCCATGGCCGCAAAGGACATGGGCACGGCTGAAAAGCTGAAGGCCGAAGTGGGCGAACTG AAAGATTTTCTCGCCCATGCGGAAGAAGACGAGCGCCGCCTCAGCAAGGAACTGAGCGACGCATTGTCCACCATTCCCAA TATTCCGCTTGATGATGTGCCGCTCGGCAAGGATGAAAGCGACAATGTTGAGCTGCGCCGCATTGGCAACCCGCACAATT TCTCCTTCCAGCCGAAAGAGCATTTTGAGCTTGGCGAGGCGCTTGGATACATGGATTTCGAGCGCGCGGCCAAGCTTGCC GGTGCGCGCTTTACGGTGCTGAAAGGCCCGCTCGCCCGTCTTGAGCGCGCGCTTGGCCAGTTCATGCTCGATCTTCACAC GACAGAACACGGTTATACCGAAGTCATGCCGCCGCTGATGGTGCGCGACGAAGCGGTCTATGGCACGGGGCAATTGCCGA AGTTTTCAGAAGATCTTTTCCGCACGACGGATGGCCGCTGGCTGATCCCGACGGCGGAGGTGCCGCTCACCAATCTGGTT GCCGAAGAAATTGTCGATATGAAGGGGCTGCCGCTGCGCTTCACGGCGCTGACCCCATGTTTTCGCTCGGAAGCGGGGTC GGCCGGGCGCGATACGCGCGGCATGTTGCGCCAGCATCAGTTCCTGAAAGTGGAGATGGTATCGATCACCGATGCGGAAA GCTCCGTTGCCGAGCATGAGCGCATGACGGCTTGCGCGGAAGAAGTGCTGAAGCGGCTGGGCCTGCCGTTCCGTACCGTT GTGCTTTGCACGGGCGACATGGGCTTTGGCGCACAGCGGACCTATGATATCGAGGTCTGGTTGCCGGGGCAGAACACCTA TCGCGAAATTTCAAGCTGTTCGACCTGCGGTGATTTCCAGGGCCGCCGCATGAATGCCCGCTATCGCCCGGAAGGCGAGA AATCCACGCGCTTCGTGCACACCCTCAACGGGTCGGGCGTTGCTGTCGGGCGCGCGCTGATTGCGGTTATGGAAAATTAC CAGCAGGAAGACGGCAGCATTCATATTCCTGAAGCATTACAGCCATATATAGGCGGCCTCACGCGGATCGAAAAAGCCGC TTGA Protein sequence : MLDIKWIRENPETLDKALAKRGAAPLSSELIALDEKRREHVGKVQAAQERRNAASKEIGKAMAAKDMGTAEKLKAEVGEL KDFLAHAEEDERRLSKELSDALSTIPNIPLDDVPLGKDESDNVELRRIGNPHNFSFQPKEHFELGEALGYMDFERAAKLA GARFTVLKGPLARLERALGQFMLDLHTTEHGYTEVMPPLMVRDEAVYGTGQLPKFSEDLFRTTDGRWLIPTAEVPLTNLV AEEIVDMKGLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFLKVEMVSITDAESSVAEHERMTACAEEVLKRLGLPFRTV VLCTGDMGFGAQRTYDIEVWLPGQNTYREISSCSTCGDFQGRRMNARYRPEGEKSTRFVHTLNGSGVAVGRALIAVMENY QQEDGSIHIPEALQPYIGGLTRIEKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-102 | 54 |
