|
Name : rph (BL0286) Accession : NP_695490.1 Strain : Bifidobacterium longum NCC2705 Genome accession: NC_004307 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 1209181 - 1209957 bp Length : 777 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCTGGGGCGCATGGTTGAAATCAAAGACATGCTTGGCAATCACCAAATAATTCGTGCCGACGGCCGCAAGGTCGACGA ACTGCGCCCTGTGCGCATCACCCGCCACTTCACCGACGCCCCCGAAGGCTCCGTGCTCATCGAATGCGGTAACACGCGCG TGATGTGCACCGCCACTTTTACTCCCGGTGTGCCGCGTTGGCGCAAGGACTCCGGCCTCGGCTGGGTCACCGCCGAATAC TCGATGCTGCCGCGTGCCACCGCCGAACGCACCGACCGTGAATCCGTACGTGGCAAAATCGGTGGCCGTACCCACGAAAT CAGCCGACTGATTGGCCGCTGCCTGCGTGGCGTCATCGATATGAAGGCGCTCGGCGAGAATCAGATTCAGCTTGACTGCG ATGTGCTTCAGGCCGATGGCGGCACTCGCACGGCTTCCGTAACCGGTGCGTATGTGGCTTTGGTCGACGCAGTTAATTGG GCGGAGAAGCACCGCCATATCAAGTCCGCCAGCCGCGTGCTTAAGGACTATGTGTCCGCCGTGTCTGTGGGCGTGATCAA CGGCACTCCTATGCTTGACCTGCCATACATTGAAGACAGTCAGGCCATGACCGACATGAACGTGGCCATGACCGGTTCCG GCACCTTCATCGAGATTCAGGGCACCGCGGAACACCGTCCGTTCAACCGTGCCGAACTCGGCACCCTGCTTGACTTGGCC GAAAAGGGCAACAAGGAACTGCAAGCCGCCCAGCGTGCCGCTCTGTCCCTAGACTAA Protein sequence : MLGRMVEIKDMLGNHQIIRADGRKVDELRPVRITRHFTDAPEGSVLIECGNTRVMCTATFTPGVPRWRKDSGLGWVTAEY SMLPRATAERTDRESVRGKIGGRTHEISRLIGRCLRGVIDMKALGENQIQLDCDVLQADGGTRTASVTGAYVALVDAVNW AEKHRHIKSASRVLKDYVSAVSVGVINGTPMLDLPYIEDSQAMTDMNVAMTGSGTFIEIQGTAEHRPFNRAELGTLLDLA EKGNKELQAAQRAALSLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 6e-65 | 62 |
