Gene Information

Name : OB0881 (OB0881)
Accession : NP_691802.1
Strain : Oceanobacillus iheyensis HTE831
Genome accession: NC_004193
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp proteinase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 934210 - 936348 bp
Length : 2139 bp
Strand : +
Note : CDS_ID OB0881; ClpE

DNA sequence :
ATGAAGTGTCAAAACTGTGGTCAAAATGATGCAACAATAAATGCACAAATGCAGATGAATAATCAACGAATGGAAATTCA
TCTATGCCATGAATGTTTCCAAGCTATTCAAGGAAATATGATGAACTCTGACTTTTTCTCTAATTCTCCATTCGGCAATA
TGGATCAAGCATTTGCCAATAACTTTTCTCAAGGAAATGGTGGAAGTGCTACTGGTACACGCACTAAACAAAAAGCAAGT
AAAGGCAATGGCCTTATTGATCAGTTAGCAAAAAACTTAACTGATCAAGCGAGATCAGGAAATGTAGATCCTGTCATTGG
TAGAGATAAAGAAATTAAACGAGTTACGGAAACATTAAATAGAAGAAATAAAAATAACCCAGTTCTTATTGGTGAACCAG
GGGTTGGTAAAACTGCTATTGCGGAAGGACTAGCAGTCAATATAGTAGAAGGTAATGTCCCAGCTAAGTTAATGAATAAA
GAAATTTATTTATTAGATGTAGCTTCATTAGTTGCAAATACTGGAGTTCGAGGTCAATTTGAAGAAAGAATGAAGAAGTT
AGTTGAAGAATTACAATCAAGAAAAGATGTTATCTTATTCATTGACGAAATTCATTTAATCGTTGGAGCTGGAACAGCAG
AAAGTTCACAAATGGATGTTGGTAACTTATTAAAACCAGCATTGGCACGTGGAGATTTACAAATAATTGGTGCTACAACA
CTTAAGGAATATCGACAAATAGAAAAAGACGCTGCACTTGAACGACGCTTGCAGCCAATTATGGTAAACGAACCATCTTT
TGAAGATGCAGTAACCATATTGGAAGGTATCAAAGAGCGATACGAAAAATTCCATGAAGTTCGTTATTCTGAGGATGTCA
TTCGTGCATTTGTTAACTTATCAAGTAGATATATTCAAGATCGTCATTTACCTGATAAAGCCATCGATTTAATGGATGAA
GTAGGTTCTAGATTGAATTTATCCAATGCACAGAAAGACTCTGCTACACTTCAACAACAACTCGACGAAATCATTAAGAA
GAAACAAGAAGCTGCTGATATAGAGGATTATGAAAAAGCAGCAAACTTAAGATATCAAGAAATTCAATTACAAAAACAAT
TGGATAAAGTTGAAGAAGGCGAAAAAGTTTTAGATGTTGATATCAGTGATATCGAGTTGATTGTAGAAGAGAAGACAGGC
ATTCCAGTAACGAAGATGCAAAAAGATGAACAAGAAAAAATGAAAAATCTGTCTGATCAACTAAGTCAGAAGGTGATTGG
CCAGAACGAGGCAGTGCAAAAAGTAGCAAAAGCAATCCGTCGTAGTCGTGCAGGCTTAAAAGCAAAACAACGTCCAATCG
GATCATTCTTATTTGTTGGACCTACAGGTGTGGGTAAAACAGAACTTACGAAAGTACTAGCAGAAGAACTATTTGGTTCC
AGAGATTCTATGGTAAGACTAGATATGAGTGAGTATATGGAGAAACACGCTGTATCTAAAATAATTGGTTCACCACCTGG
TTATGTAGGTCATGAAGAAGCTGGTCAACTTACCGAGCGAATCCGTCGTAATCCATATTCTATTCTTCTACTAGATGAGA
TTGAAAAAGCTCATCCAGATGTACAAAATATGTTCTTACAGATTATGGAAGATGGTCAATTGACTGATTCTCAAGGTAGA
AAAGTAAGCTTTAAAGATACAGTTATCATCATGACAAGTAACGCTGGTACTGGTGTAAAACAGGTTAATGTTGGTTTTAA
TCGTGAAGCCCATGAATCTGTATCCACACTAGAAAACTTGAGCGAATACTTTAAACCAGAATTTCTAAACCGATTTGATG
CTATCGTTAACTTCCAAGAGTTAGCAGAAGAAGACTTGCTACAAATTATTGATCTTATGTTGTCTGAATTAGAAGCAACA
ATAAAAGAAAATAAAATGACAATAACTATATCTGAAGAAGCGAAACAACAGTTAGTAAAATTAGGATATGATACACGTTT
TGGAGCGCGTCCTTTACGTCGTGTTATCCAAGATAAGATTGAAGATCCATTAACTGATCTCATTCTAGAAGGTGAAGATA
TAACTTCTATTAATGTTGATGTCAAAGAAGATGAAATTGTTGTAAACCAAGCTTCTTAA

Protein sequence :
MKCQNCGQNDATINAQMQMNNQRMEIHLCHECFQAIQGNMMNSDFFSNSPFGNMDQAFANNFSQGNGGSATGTRTKQKAS
KGNGLIDQLAKNLTDQARSGNVDPVIGRDKEIKRVTETLNRRNKNNPVLIGEPGVGKTAIAEGLAVNIVEGNVPAKLMNK
EIYLLDVASLVANTGVRGQFEERMKKLVEELQSRKDVILFIDEIHLIVGAGTAESSQMDVGNLLKPALARGDLQIIGATT
LKEYRQIEKDAALERRLQPIMVNEPSFEDAVTILEGIKERYEKFHEVRYSEDVIRAFVNLSSRYIQDRHLPDKAIDLMDE
VGSRLNLSNAQKDSATLQQQLDEIIKKKQEAADIEDYEKAANLRYQEIQLQKQLDKVEEGEKVLDVDISDIELIVEEKTG
IPVTKMQKDEQEKMKNLSDQLSQKVIGQNEAVQKVAKAIRRSRAGLKAKQRPIGSFLFVGPTGVGKTELTKVLAEELFGS
RDSMVRLDMSEYMEKHAVSKIIGSPPGYVGHEEAGQLTERIRRNPYSILLLDEIEKAHPDVQNMFLQIMEDGQLTDSQGR
KVSFKDTVIIMTSNAGTGVKQVNVGFNREAHESVSTLENLSEYFKPEFLNRFDAIVNFQELAEEDLLQIIDLMLSELEAT
IKENKMTITISEEAKQQLVKLGYDTRFGARPLRRVIQDKIEDPLTDLILEGEDITSINVDVKEDEIVVNQAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 5e-151 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OB0881 NP_691802.1 ATP-dependent Clp proteinase VFG0080 Protein 0.0 59
OB0881 NP_691802.1 ATP-dependent Clp proteinase VFG0079 Protein 8e-155 50