Gene Information

Name : OB3405 (OB3405)
Accession : NP_694327.1
Strain : Oceanobacillus iheyensis HTE831
Genome accession: NC_004193
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate transport system permease large protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 3540725 - 3542032 bp
Length : 1308 bp
Strand : +
Note : CDS_ID OB3405

DNA sequence :
ATGGATGTAACTGTATGGACAGCCATTATATTATTTGGATCGTTTTTCTTACTCTTATTTATTGGCGTACCGATTGCCGT
AAGTATCACTATTTCTTCTTTTGTGTCTATTTTAATTCTACTTCCTATGACACCATCCTTATTAGCGGTGTCCCAACAAA
TCATTACCGGGCTAGATAGTACGGTGTTATTGGCACTTGTATTCTTTATGCTGGCGGGAAGTATTATGAATAATGGCGGG
ATTGCCGATCGGCTGATTAATTTAGCAAAGTTAATTGGTGGTAGAATGTCCGGTTCACTCGCACATACGAATATTATCGG
AAATACACTGTTTGGCGCGATATCAGGTTCAGCAATTGCCGCAGCCGCAACAATGGGACGGATTATGCACCCTCAAGAGA
AAAAAGCAGGTTATGACCCTTCGTATGCAGCAGCTGTAAATATCGCTTCCGCACCGACGGGATTAATTATCCCTCCAAGC
GGGATGCCGATTATTTACTCTCTATTAACCGGTGGCACATCGATTGGTGCTTTATTTATCGCAGGGTACTTACCTGGTCT
GTTGATGATTGCGTTACTCATGATCGTCGCCTATATATTAGCGAAAAAAGCCAAATATCCTGTATCCAAACCAATCAGTG
GCGGCGAATCCTTCAAAGTAATACTTCAAGCGATCCCTAGTTTATTATTAATTATTATTGTCATAGGTGGAATTGCCGGA
GGGATTTTTACAGCAACAGAAGGAGCTGCAGTAGCTGTACTATATGCTTCTATCCTTAGCGTTATTTACCGTCAGTTAAA
ACTAACCGACATCCCTAAAATACTTAGAGAAACGACGATTTATTCTGGTATTATCATGTTATTAATAGGAGCATCTACTG
CGATGTCCTGGGTACTTGCATACGCAGGTATACCACAGGCAATTACAAGCAGTCTATTAAGCATTACCGATAATACAACC
ATTCTACTGTTGATCATGTTAGTGATTTTACTAGTAGTTGGAACCTTTATGGATATTGCACCAGCGCTATTAATTTTCAC
ACCGATATTCTTCCCGGTCGCAACACAAATGGGCATCGATCCCGTCCATTTTGGAATGATAATGGCTGTAGCTCTTGCTA
TTGGAGTAACCACTCCGCCAATTGGGACCGTGTTATTTATCGGAAGTAGTGTCAGCGGAGTACCTATCGAAAAAATCATA
CCGAAGCTGCTCATCTTCTATATTCCATTAATCGTAGCGCTATTACTCGTTGCGTTTATTCCAGAAATCAGCTTATTCTT
ACCAAAGTTATTTGGTTTATTGGATTAG

Protein sequence :
MDVTVWTAIILFGSFFLLLFIGVPIAVSITISSFVSILILLPMTPSLLAVSQQIITGLDSTVLLALVFFMLAGSIMNNGG
IADRLINLAKLIGGRMSGSLAHTNIIGNTLFGAISGSAIAAAATMGRIMHPQEKKAGYDPSYAAAVNIASAPTGLIIPPS
GMPIIYSLLTGGTSIGALFIAGYLPGLLMIALLMIVAYILAKKAKYPVSKPISGGESFKVILQAIPSLLLIIIVIGGIAG
GIFTATEGAAVAVLYASILSVIYRQLKLTDIPKILRETTIYSGIIMLLIGASTAMSWVLAYAGIPQAITSSLLSITDNTT
ILLLIMLVILLVVGTFMDIAPALLIFTPIFFPVATQMGIDPVHFGMIMAVALAIGVTTPPIGTVLFIGSSVSGVPIEKII
PKLLIFYIPLIVALLLVAFIPEISLFLPKLFGLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 4e-42 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-42 41
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 4e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OB3405 NP_694327.1 C4-dicarboxylate transport system permease large protein VFG1110 Protein 2e-42 41