Gene Information

Name : OB2687 (OB2687)
Accession : NP_693608.1
Strain : Oceanobacillus iheyensis HTE831
Genome accession: NC_004193
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2756980 - 2757867 bp
Length : 888 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGAAAGAAAACTTGGTACAGATCGAGTTAAAAGAGGAATGGCTCAAATGCAAAAAGGCGGAGTAATCATGGATGTTGT
CAATAGTGAACAGGCTAAGATAGCTGAACAAGCAGGCGCGGTTGCTGTTATGGCATTGGAACGAGTACCATCTGATATTC
GTGCTGCTGGTGGAGTTGCAAGGATGGCAAATCCGAGCTTAGTAGAAGAAATTATTCAATCCGTATCGATTCCTGTAATG
GCGAAAGCACGTATAGGTCATATTGTAGAAGCAAGAGTATTAGAATCTTTGGGAGTTGATTATATCGATGAAAGTGAAGT
GTTAACTCCAGCAGATGAAGTATTTCATTTAAATAAGTCTGATTATACAGTTCCGTTTGTTTGTGGTTGCAGAGACTTAG
GTGAAGCAGCAAGGAGAATTGGAGAAGGAGCAGCAATGCTACGTACGAAAGGAGAACCGGGTACAGGGAATATTGTGGAA
GCGGTTCGTCATATACGAGAGGTTCAAGCGCAAGTCAACAAAGTTGTTCATATGAGCAAAGATGAATTAATGACAGAAGC
AAAAAATCTTGGAGCACCGTATGAGATACTTTTGCAAATTAAAGAAAATGGTAGATTACCAGTCGTTAATTTTGCAGCAG
GAGGAGTAGCTACACCAGCAGACGCTGCGTTGATGATGGAATTAGGAGCAGACGGTGTGTTTGTTGGATCTGGTATCTTT
AAATCTCATCATCCTGAGAAGTTTGCCCGTGCGATTGTACAAGCAACTACGTATTTTGACGATTATGAACGTATTGCAGA
AGTATCAAAAGATCTAGGGGAAGCGATGACAGGGATAGATGTGCATTCTCTAGCTGCTGATCAACGTATGCAAGAACGTG
GTTGGTAA

Protein sequence :
MERKLGTDRVKRGMAQMQKGGVIMDVVNSEQAKIAEQAGAVAVMALERVPSDIRAAGGVARMANPSLVEEIIQSVSIPVM
AKARIGHIVEARVLESLGVDYIDESEVLTPADEVFHLNKSDYTVPFVCGCRDLGEAARRIGEGAAMLRTKGEPGTGNIVE
AVRHIREVQAQVNKVVHMSKDELMTEAKNLGAPYEILLQIKENGRLPVVNFAAGGVATPADAALMMELGADGVFVGSGIF
KSHHPEKFARAIVQATTYFDDYERIAEVSKDLGEAMTGIDVHSLAADQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-78 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-78 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-78 64