Gene Information

Name : OB2424 (OB2424)
Accession : NP_693345.1
Strain : Oceanobacillus iheyensis HTE831
Genome accession: NC_004193
Putative virulence/resistance : Resistance
Product : arsenic efflux pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2477017 - 2478315 bp
Length : 1299 bp
Strand : -
Note : CDS_ID OB2424

DNA sequence :
TTGTCATCAGTGTTTATTACATCAAGTATATTTTTACTTACGCTCATATTAGTGATATGGCAACCAAAGAATTTAAATAT
CGGCTGGTCAGCATGTGGGGGAGCAATTGTTGCTTTACTTTTTGGTGTTGTCAGCATTAGTGATGTCTGGGATGTAACGG
GAATTGTTTGGAATGCAACTCTTACATTTATTGCAATCATTCTTATATCATTAATATTGGATGAAATTGGGTTTTTCGAA
TGGTCTGCGCTTCATATGTCACGTCTTGCAAAAGGCAATGGAATTCTAATGTTTATTTATGTTTGTGTGCTTGGGTCAAT
TGTTGCCGCATTTTTTGCCAATGATGGGGCAGCACTAATCTTAACACCAATTGTATTAGCAATGGTACGATCCTTAGACT
TTGATGAAAAAATAGTTTTCCCATTTATCATTGCAAGTGGATTTATTGCAGATACAACTTCACTTCCTTTAATCGTAAGT
AACTTAGTAAATATTGTTTCAGCGGACTTCTTTGGAATTGGATTTGTGGAATATGCGACACATATGATTGTTCCAACAAT
TGTTGCACTTGGATCTAGTATAATTGTGCTTTTCGTTTATTTTCGAAAAAGAATTCCAAGAACATACGATTATTCCAAAT
TAAAAGAACCGCATGAGGCGATTAAAGATCATCGTATGTTTCGCTTATCGTGGTTTGTATTAGGTTTGTTATTAGTCGGA
TATTTAGTTAGTGAGTTTGTTGGTATTCCAGTATCCTTTATAGCTGGTGTGATTGCTATTATATTTTTAATTGTTGCGAA
GAATAGTAAGGCTGTTAATACGATGACGGTTGTAAAAGGCGCTCCATGGAATATTGTCTTTTTCTCCATCGGTATGTATG
TGGTAGTTTATGGATTGCGTAATGTTGGACTAACGGATATTTTGGCTGATATTATACAAGTTGTTGCAGATCAAGGAATG
TTTGCAGCAACCATGGGAATGGGCTTCATTGCTGCATTTTTATCTTCCATAATGAATAATATGCCAACAGTGATGATTGA
TGCTCTTGCAATTGCCGAAACTTCTACAAGTCAGATGGTACGCGAGGCTTTAATCTATGCTAATGTTGTTGGTGCAGACT
TAGGGCCAAAGATTACACCAATTGGATCTTTAGCAACATTATTATGGCTTCACGTCCTAACTCAAAAAGGAGTTAAAATA
TCGTGGGGTACTTACTTTAAAACCGGAATTGTAATAACAATACCTGTCTTATTTATGACTCTTGCAGGATTGTTTATGTG
GTTAATGATTATAAATTAA

Protein sequence :
MSSVFITSSIFLLTLILVIWQPKNLNIGWSACGGAIVALLFGVVSISDVWDVTGIVWNATLTFIAIILISLILDEIGFFE
WSALHMSRLAKGNGILMFIYVCVLGSIVAAFFANDGAALILTPIVLAMVRSLDFDEKIVFPFIIASGFIADTTSLPLIVS
NLVNIVSADFFGIGFVEYATHMIVPTIVALGSSIIVLFVYFRKRIPRTYDYSKLKEPHEAIKDHRMFRLSWFVLGLLLVG
YLVSEFVGIPVSFIAGVIAIIFLIVAKNSKAVNTMTVVKGAPWNIVFFSIGMYVVVYGLRNVGLTDILADIIQVVADQGM
FAATMGMGFIAAFLSSIMNNMPTVMIDALAIAETSTSQMVREALIYANVVGADLGPKITPIGSLATLLWLHVLTQKGVKI
SWGTYFKTGIVITIPVLFMTLAGLFMWLMIIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-133 71
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-129 70
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-125 69
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 6e-111 62

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OB2424 NP_693345.1 arsenic efflux pump BAC0574 Protein 1e-130 71
OB2424 NP_693345.1 arsenic efflux pump BAC0575 Protein 5e-134 71
OB2424 NP_693345.1 arsenic efflux pump BAC0578 Protein 3e-110 62
OB2424 NP_693345.1 arsenic efflux pump BAC0576 Protein 5e-110 62
OB2424 NP_693345.1 arsenic efflux pump BAC0031 Protein 1e-111 61
OB2424 NP_693345.1 arsenic efflux pump BAC0577 Protein 2e-107 60