Gene Information

Name : OB0093 (OB0093)
Accession : NP_691014.1
Strain : Oceanobacillus iheyensis HTE831
Genome accession: NC_004193
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 111692 - 114121 bp
Length : 2430 bp
Strand : +
Note : CDS_ID OB0093; ATP-binding subunit

DNA sequence :
ATGATGTTTGGACGCTTTACAGAAAGAGCACAAAAAGTACTCGCACTATCACAGGAAGAAGCAGTACGTTTAGGACATAA
TAACATTGGTACAGAACACATTTTGCTAGGACTTGTACGAGAAGGAGAAGGAATTGCAGCAAAAGCTCTACAATCTCTAG
GTCTAGAAGTATCCAAAATACAAGAAGAAGTAGAGAAATTAATCGGAGTAGGAAAACAACCTACACAATCGATTCACTAT
ACACCTCGTGCCAAAAAAGTAGTTGAACTTTCTCAAGATGAAGCACGAAAACTAGGTCACTCTTATGTAGGTACAGAGCA
TATTCTACTTGGATTGATTAGAGAAGGAGAAGGAGTAGCTGCTAGAGTACTTAATAATCTAGGTGTAAGTCTTAATAAAG
CAAGACAACAAGTTCTCCAACTACTAGGTAGCAATGAATCACAAGCTGGTCGTCAAGGGCGTTCAGGACAACAGTCAAAT
GCAAGCACACCAACATTGGATTCATTAGCTCGAGATTTAACAGTTAGTGCCAAAGAGGGCAAAATTGACCCAGTAATTGG
TCGCTCTAAAGAAATTGAACGAGTGATTCAAGTGCTTAGCCGTCGTACAAAGAACAATCCTGTTTTGATAGGGGAACCTG
GTGTAGGTAAAACGGCTGTCGCCGAAGGACTTGCACAACAAATTATAGACAATGAAGTTCCAGAAACCTTACGTGATAAA
CGAGTAATGACATTAGACATGGGGACAGTTGTTGCCGGTACAAAATATCGTGGTGAATTCGAAGACCGCTTGAAGAAAGT
AATGGAAGAAATTCGCCAGGCAGGTAATATTATTCTATTCATTGATGAGTTACACACGCTTATCGGAGCTGGAGGAGCAG
AAGGGGCTATTGATGCTTCAAACATCCTCAAACCATCTCTTGCACGTGGAGAATTACAATGTATTGGTGCAACTACACTT
GATGAATATCGGAAATATATTGAAAAAGACGCTGCATTAGAACGACGTTTCCAACCAATTCAAGTAGATGAACCAACATT
GGAAGAAACCATTCAAATTCTAAATGGATTACGTGATCGTTATGAAGCGCATCACCGTGTAACCATTACTGACGAAGCGA
TCGAAGCAGCAGCTTCACTATCTGATCGTTATATTACCGATCGATTCTTGCCAGATAAAGCGATTGACTTAATCGACGAA
GCAGGATCAAAAGTAAGGTTACGCTCTTATACTGTTCCACCAAACTTAAAAGAGTTGGAACAGAAACTAGATGAAGTTCG
TAAAGAAAAAGACGCGGCGGTACAAAGCCAAGAATTTGAAAAAGCTGCATCTTTACGAGATTCGGAGCAACGTTTCCGCG
AAGAATTAGAAACAACGAAAAATCAATGGAAAGAAAAACAAGGGCAAACAGATTCAGAAGTTACCATGGAAGATATTGCT
GCAGTTGTGTCTACATGGACGGGAGTACCTGTTTCTAAATTAACAAAAGATGAAACTGATCGACTTCTAAATATGGAAAA
AATCCTTCATGACCGCGTTATCGGGCAGTCGGAAGCGGTTAATGCAGTTGCTAAAGCAATACGACGTGCTCGTGCAGGTT
TAAAAGATCCAAAACGTCCAATTGGTTCGTTTATTTTCTTAGGACCAACGGGTGTAGGTAAAACGGAACTTGCTCGTGCG
TTAGCAGAAGTAATGTTTGCAGATGAAGATGCGATGATCCGTATTGATATGTCTGAGTATATGGAGAGACATGCAACTTC
ACGCTTGGTTGGTTCACCACCAGGATATGTTGGATACGACGAAGGTGGACAATTAACTGAAAAAGTTCGTCGTAAGCCTT
ACTCTGTTGTTCTATTAGATGAGGTGGAAAAAGCACATCCAGAAGTATTTAATATTCTTTTACAAGTGCTAGAAGATGGT
CGCTTAACTGATTCAAAAGGAAGAGTGGTTGATTTCCGTAATACAGTTATCATCATGACGTCCAATGTTGGGGCAAGCGA
ATTAAAACGTAATAAATATGTTGGTTTCGCTTTAGATAATGAGGAAAAAGACTATAAAGATATGAAATCAAAAGTGATCG
AAGAATTGAAGAAAGCTTTCCGTCCAGAGTTTTTAAATCGTATTGATGAAACAATTGTCTTCCATTCTTTAGAAAAAGAG
CATATGAAAGATATTGTGACATTGATGGTACAACAATTACAAAAACGACTAAAAGAACAAGACCTTCACCTATCATTAAC
AGATAAGGCGATTGAAAAAATAGCTAATGAAGGCTTCGATCCAGAATACGGTGCTCGACCTTTACGTCGATCCATTCAAA
AAAATATCGAAGACTTATTGTCAGAAGAGCTATTAAGAGGAGCCATTGAAAAAGAGCAACAGGTTAAAATTGGTTTAAAT
AATAAAGGTGAATTTATTGTTTTACCATAG

Protein sequence :
MMFGRFTERAQKVLALSQEEAVRLGHNNIGTEHILLGLVREGEGIAAKALQSLGLEVSKIQEEVEKLIGVGKQPTQSIHY
TPRAKKVVELSQDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESQAGRQGRSGQQSN
ASTPTLDSLARDLTVSAKEGKIDPVIGRSKEIERVIQVLSRRTKNNPVLIGEPGVGKTAVAEGLAQQIIDNEVPETLRDK
RVMTLDMGTVVAGTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTL
DEYRKYIEKDAALERRFQPIQVDEPTLEETIQILNGLRDRYEAHHRVTITDEAIEAAASLSDRYITDRFLPDKAIDLIDE
AGSKVRLRSYTVPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDSEQRFREELETTKNQWKEKQGQTDSEVTMEDIA
AVVSTWTGVPVSKLTKDETDRLLNMEKILHDRVIGQSEAVNAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARA
LAEVMFADEDAMIRIDMSEYMERHATSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEVEKAHPEVFNILLQVLEDG
RLTDSKGRVVDFRNTVIIMTSNVGASELKRNKYVGFALDNEEKDYKDMKSKVIEELKKAFRPEFLNRIDETIVFHSLEKE
HMKDIVTLMVQQLQKRLKEQDLHLSLTDKAIEKIANEGFDPEYGARPLRRSIQKNIEDLLSEELLRGAIEKEQQVKIGLN
NKGEFIVLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
OB0093 NP_691014.1 ATP-dependent Clp protease VFG0079 Protein 0.0 77
OB0093 NP_691014.1 ATP-dependent Clp protease VFG0080 Protein 5e-154 53