Gene Information

Name : PFL_0099 (PFL_0099)
Accession : YP_257251.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG1127
EC number : -
Position : 99944 - 100747 bp
Length : 804 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
GTGAGCCGGCCGCCACGCGCGCCGGCGAAGGCGGTGATCGAGGTCCGTGGCCTGTGCAACCGCTTCGGCAAGCAGAGCGT
GCACGAGAACCTCGACCTGGATGTGTACCAGGGCGAGATCCTCGGCGTGGTCGGCGGCTCGGGCAGCGGCAAGTCGGTAC
TGCTGCGCAGCATCGTCGGCCTGCGCCAGCCCAGCGAAGGCTCGGTGCGGGTATTCGGCCAGGACCTGCCAAGCCTGCCG
GAACAGCAACGCTCGCTGATCGAACGACGCTTCGGCGTACTGTTCCAGAAGGGCGCGCTGTTCACCTCGCTGACCGTGAC
CGAGAACGTCGCCCTGCCATTGATCGAGCATGCCGGCCTGTCCCGTGCCGATGCCGAACACCTGGCGGCGGTCAAGCTGG
CCCTGGCCGGCCTGCCGCTGTCGGCGGCCGACAAATACCCGGCCTCGCTCTCTGGCGGGATGATCAAGCGCGCTGCCCTG
GCCCGGGCGCTGGCCCTGGACCCGGACATCCTGTTTCTCGACGAACCCACCGCCGGCCTCGACCCGGTGGGCGCCGCCGC
CTTTGACCAGTTGATCCTGACCCTGCGCGATGCCCTGGGGCTCAGTGTGTTCCTGGTCACCCACGACCTGGACACCCTCT
ACACCATCACCGACCGTGTGGCGGTGCTGGCGCAGAAAAAGGTACTGGTGGCGGATGCCATCGATATCGTCGCCGAGACC
GACGACGAATGGATTCACCAATACTTCCATGGCCCTCGCGGCCGCGCGGCCTACCAGGCCGCTACACAGACCAACGAGGG
ATGA

Protein sequence :
MSRPPRAPAKAVIEVRGLCNRFGKQSVHENLDLDVYQGEILGVVGGSGSGKSVLLRSIVGLRQPSEGSVRVFGQDLPSLP
EQQRSLIERRFGVLFQKGALFTSLTVTENVALPLIEHAGLSRADAEHLAAVKLALAGLPLSAADKYPASLSGGMIKRAAL
ARALALDPDILFLDEPTAGLDPVGAAAFDQLILTLRDALGLSVFLVTHDLDTLYTITDRVAVLAQKKVLVADAIDIVAET
DDEWIHQYFHGPRGRAAYQAATQTNEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-09 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-09 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-09 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-09 41