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Name : smpB (PFL_0819) Accession : YP_257954.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 947985 - 948467 bp Length : 483 bp Strand : - Note : identified by similarity to SP:P32052; match to protein family HMM PF01668; match to protein family HMM TIGR00086 DNA sequence : ATGGCTAAACAGAAGAAACACCCAACAGGGACCATCGCGCAAAATAAAAAGGCGCGTCACGATTACTTCATCGAACATCG GTTCGAGGCTGGCATGGTCCTGGCCGGCTGGGAAGTAAAGAGTCTGCGTGCAGGCAAGGCACAGCTGGTGGACAGTTATG TGCTGCTCAAGGATGGTGAAGCCTGGTTGCTCGGCAGCCACTTCACGCCATTGACCACCGCCAGCACCCACGTCATCGCC GACCCGACGCGCTCGCGCAAGCTGCTGCTCAACCAGCGAGAGCTGGAAAAGCTGTTTGCCGCCGTGCAGCAGAAGGGTTA CGCCTGCGTGTGCCTTTCGCTCTACTGGAGCAAGCACCTGGTCAAGTGTGAAATCGCACTGGGCAAGGGCAAGAAGGAAT ACGACAAGCGTCATACCGAACGCGAGCGCGATTCCGATCGTGAGCTGCAGCGCGCGGTGCGGACCAAGGGCAAGGAAGAC TGA Protein sequence : MAKQKKHPTGTIAQNKKARHDYFIEHRFEAGMVLAGWEVKSLRAGKAQLVDSYVLLKDGEAWLLGSHFTPLTTASTHVIA DPTRSRKLLLNQRELEKLFAAVQQKGYACVCLSLYWSKHLVKCEIALGKGKKEYDKRHTERERDSDRELQRAVRTKGKED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-35 | 54 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-23 | 45 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-24 | 44 |
