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Name : glcA (PFL_0817) Accession : YP_257952.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : glycolate permease GlcA Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 945180 - 946874 bp Length : 1695 bp Strand : - Note : identified by similarity to SP:Q46839; match to protein family HMM PF02652; match to protein family HMM TIGR00795 DNA sequence : ATGCAAACCTGGCAACAGCTCTATAGCCCGCTTGGCAGCCTCGGCCTGTCCGCCCTCGCCGCCGTCATCCCGATCGTGTT CTTCTTCCTGGCTCTGGCCGTGTTCCGTCTCAAAGGACACGTCGCCGGGAGTATCACCCTGGCCTTGTCGATCCTGGTGG CGATCTTCGCCTTCCAGATGCCCGCCGACATGGCCCTCGCTGCCGCTGGCTATGGATTTGCCTACGGTCTGTGGCCCATC GCCTGGATCATTGTCGCCGCCGTTTTCCTCTACAAGCTGACCGTGAAGAGCGGCCAGTTCGAAATCATCCGCAGCTCGGT GCTGTCGATCACCGACGACCAGCGCCTGCAGGTGCTGCTGATCGGTTTCTGCTTCGGCGCCTTCCTCGAAGGTGCGGCAG GCTTCGGTGCGCCAGTGGCGATCACCGCCGCCCTGCTGGTGGGCCTGGGCTTCAACCCGCTGTACGCCGCCGGCCTGTGC CTGATCGCCAACACCGCGCCCGTGGCCTTCGGCGCCCTGGGGATTCCGATCATCGTCGCCGGCCAGGTGACGGGCATCGA CGCCTTCAAGATCGGCGCCATGACCGGCCGCCAACTGCCGCTGCTGTCGCTGTTCGTGCCGTTCTGGCTGGTGTTCATGA TGGACGGCATGCGTGGCGTCAAAGAGACCTGGCCGGCCGCTCTGGTGGCAGGCCTGAGCTTCGCCGTCACCCAGTACTTC ACCTCGAACTTCATCGGCCCGGAACTGCCGGACATCACCTCGGCCCTGGCCAGCCTGATCTCCCTGACCCTGTTCCTGAA AATCTGGCAGCCCAAGCGCACCGCCGGCGCGCAGATTGCCGGTGCCACCTCCAGCGCGGCCATCACCGCCAGTGCCGGTG GCTTCGGCCAGCCACGCCAAACCCAGGCCTCACCCTACAGCCTGGGCCAGATCTTCAAGGCCTGGTCGCCGTTCCTGATC CTCACCGTGCTGGTGACCATCTGGACCCTCAAGCCCTTCAAGGCGATGTTCGCTGCCGGCGGCTCGATGTACGGCTGGGT GTTCAACTTCGCCATCCCGCACCTGGATCAGTTGGTGATCAAGATGGCGCCGATCGTGACCACGCCAACGGCCATCCCGG CGGTATTCAAGCTCGACCCGATCTCGGCCACCGGCACGGCGATCTTCTTCTCCGCGCTGATCTCAATGCTGTTGCTGAAG ATCGACTTCAAAACTGGTCTGACCACTTTGAAAGAGACCTTCTACGAGCTGCGCTGGCCGATCCTGTCCATCGGCATGGT GCTGGCGTTCGCCTTCGTCACCAACTACTCGGGCATGTCCTCGACCATGGCCCTGGTCCTGGCGGCGACGGGCGCAGCGT TTCCGTTCTTCTCGCCGTTCCTGGGCTGGCTCGGAGTGTTCCTCACTGGTTCCGATACCTCGTCCAACGCCCTGTTCAGT TCGCTGCAGGCCACCACCGCGCACCAGATCGGGGTCAATGACACCCTGCTGGTCGCGGCCAACACCAGCGGCGGCGTAAC CGGCAAGATGATCTCGCCGCAATCGATCGCCGTGGCCTGCGCCGCCACCGGCCTGGTGGGCAAGGAGTCGGACCTGTTCC GCTTCACCCTCAAGCACAGTCTGTTCTTTGCCACTATTGTCGGTCTGATCACCCTGGCCCAGGCCTACTGGTTCACCGGC ATGCTGGTGCACTAA Protein sequence : MQTWQQLYSPLGSLGLSALAAVIPIVFFFLALAVFRLKGHVAGSITLALSILVAIFAFQMPADMALAAAGYGFAYGLWPI AWIIVAAVFLYKLTVKSGQFEIIRSSVLSITDDQRLQVLLIGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC LIANTAPVAFGALGIPIIVAGQVTGIDAFKIGAMTGRQLPLLSLFVPFWLVFMMDGMRGVKETWPAALVAGLSFAVTQYF TSNFIGPELPDITSALASLISLTLFLKIWQPKRTAGAQIAGATSSAAITASAGGFGQPRQTQASPYSLGQIFKAWSPFLI LTVLVTIWTLKPFKAMFAAGGSMYGWVFNFAIPHLDQLVIKMAPIVTTPTAIPAVFKLDPISATGTAIFFSALISMLLLK IDFKTGLTTLKETFYELRWPILSIGMVLAFAFVTNYSGMSSTMALVLAATGAAFPFFSPFLGWLGVFLTGSDTSSNALFS SLQATTAHQIGVNDTLLVAANTSGGVTGKMISPQSIAVACAATGLVGKESDLFRFTLKHSLFFATIVGLITLAQAYWFTG MLVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 4e-147 | 76 |
