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Name : tssE (PFL_6090) Accession : YP_263148.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : type VI secretion protein TssE Function : - COG functional category : S : Function unknown COG ID : COG3518 EC number : - Position : 6916836 - 6917351 bp Length : 516 bp Strand : + Note : See Hsu et. al. 2009 (PMID: 19400797) for more information.; identified by similarity to GB:AAG03477.1; match to protein family HMM PF04965; match to protein family HMM TIGR03357 DNA sequence : TTGGTAACCGACATCGCCGCCCGCGATCGCTTGCAACCCTCCCTGCTGGATCGTCTGACCGACGATGAACCCGGCAACCT GAAAGAAAGCCCGGACAAACGCGTGCTGTCCCTGAGCCAGCTCAAGGCCTCGGTACTGCGCGACCTGGCATGGCTGCTCA ACACCACTTCCCTGCTGGAAGCCGACGCCACCCTGCACACACCCGCCGGTACTTCGGTGGTCAACTACGGCCTGCCGGCC CTGGCCGGGTACAGCGCTTCGAGCATCGATATCCCGGCCCTGGAGGCGCTGATCCACCAGGCCATCGCCACCTTTGAGCC GCGCATCCTGCGCAGCACCCTGCGGGTACGCGCACGCACCGCGCCCGGGGAAATGAACCACAACGCCCTGAGCTTCGAGA TCGAAGGCGACCTCTGGGCCCAGCCGATGCCCCTGCGTCTGCTGCTGCAAACCGACATGGACCTGGAATCGGGACACGTA CGAGTGGTGCACGCCGACTCCCGGAGGCGCTCATGA Protein sequence : MVTDIAARDRLQPSLLDRLTDDEPGNLKESPDKRVLSLSQLKASVLRDLAWLLNTTSLLEADATLHTPAGTSVVNYGLPA LAGYSASSIDIPALEALIHQAIATFEPRILRSTLRVRARTAPGEMNHNALSFEIEGDLWAQPMPLRLLLQTDMDLESGHV RVVHADSRRRS |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tssE | YP_263148.2 | type VI secretion protein TssE | VFG2073 | Protein | 2e-55 | 69 |
