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Name : hcp (PFL_6089) Accession : YP_263147.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : type VI secretion system effector Hcp Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 6916187 - 6916675 bp Length : 489 bp Strand : + Note : identified by similarity to GB:AAG03475.1; match to protein family HMM PF05638; match to protein family HMM TIGR03344 DNA sequence : ATGGCTGTTGATATTTTCATCAAGATCGGTGACATCAAGGGCGAGTCCATGGACAAAGCCCACAAGGACGAAATCGACGT GTTGAACTGGAGCTGGGGCATGTCCCAGTCCGGCAACATGCACGTTGGCGGTGGCGGCGGCGCGGGCAAGGTGAACATCC AGGACCTGTCGCTGACCAAGTACGTGGACAAGGCATCGCCGAACCTGATGATGCATTGCTCCAGCGGCAAGCACATCGAC AAGGTGCGCCTGACCGTGCGCAAGGCCGGCGGCGAAAGCCAGGTCGAGTACATGATCATCGACCTGGAAGAAGTGCTGAT CACTTCCCTGAGCACCGGCGGTTCGGGCAGCGATGACCGCCTGACCGAAAACATCACCCTGAACTTCGCTCAGGTGATGG TCGAGTACCAGCCGCAGAAAGCCGACGGCACCAAGGACGGCGGCCCGATCAAGTACGGCTGGAACATCCGCTCCAACACC AAGCGCTGA Protein sequence : MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHVGGGGGAGKVNIQDLSLTKYVDKASPNLMMHCSSGKHID KVRLTVRKAGGESQVEYMIIDLEEVLITSLSTGGSGSDDRLTENITLNFAQVMVEYQPQKADGTKDGGPIKYGWNIRSNT KR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0302 | NP_454882.1 | conserved hypothetical protein | Not tested | SPI-6 | Protein | 3e-25 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hcp | YP_263147.1 | type VI secretion system effector Hcp | VFG2071 | Protein | 1e-45 | 77 |
