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Name : ctaD (PFL_0062) Accession : YP_257214.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 61002 - 62597 bp Length : 1596 bp Strand : + Note : identified by similarity to SP:P31833; match to protein family HMM PF00115; match to protein family HMM TIGR02891 DNA sequence : ATGAGTGCTGTGATCGATGACCACGGCCACGCCGGCCATGATGACCACGCCCATGGCCCGGCCAAGGGCCTGATGCGCTG GGTACTGACCACCAACCACAAGGACATCGGCACCCTGTACCTGTGGTTCAGCTTCTGCATGTTCCTGCTGGGCGGCTCGT TCGCCATGGTGATCCGTGCCGAACTGTTCCAGCCCGGGCTGCAGATCGTCGAGCCGGCGTTCTTCAACCAGATGACCACC ATGCATGGCCTGGTGATGGTCTTCGGTGCTGTGATGCCGGCCTTCGTCGGCCTGGCCAACTGGATGATCCCGTTGATGAT CGGCGCGCCGGACATGGCCCTGCCGCGGATGAACAACTTCAGCTTCTGGCTGCTGCCGGCGGCCTTCCTGTTGCTGATCT CGACCCTGTTCATGCCCGGCGGCGGGCCGAACTTCGGCTGGACCTTCTATGCCCCCCTGTCCACCACCTACGCCCCGGAA AGCGTGACCTTCTTCATCTTCGCCATCCACCTGATGGGCGTCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCAT CCTCAACCTGCGAGCCCCGGGCATGACCCTGATGAAGATGCCACTGTTCGTCTGGACCTGGCTGATCACCGCCTTCCTGC TGATTGCGGTGATGCCGGTACTGGCCGGGGTGGTGACCATGATGCTGATGGACATCCATTTCGGCACCAGCTTCTTCAGT GCAGCCGGCGGCGGTGACCCGGTGTTGTTCCAGCACGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCT GCCGGCCTTCGGCGCGGTCAGCTCGATCATCCCCACCTTCAGCCGCAAGCCACTGTTCGGCTACACCTCGATGGTCTATG CCACCGGAGCGATCGCCTTCCTGTCGTTCATCGTCTGGGCGCACCACATGTTCGTGGTGGGCATCCCGCTGGTGGGCGAG CTGTTCTTCATGTACGCCACCCTGCTGATCGCCGTGCCCACTGGAGTCAAGGTGTTCAACTGGGTGAGTACCATGTGGCA GGGCTCGCTGACCTTCGAGACACCGATGCTGTTCGCGGTGGCCTTCGTCATCCTGTTCACCATCGGCGGTTTCTCCGGGC TGATGCTGGCCATTGCTCCGGCGGACTTCCAGTACCAGGACACCTACTTCGTGGTGGCGCACTTCCACTACGTACTGGTG CCGGGGGCGATCTTCGGGATCTTCGCCTCGGCCTACTACTGGCTGCCCAAGTGGACCGGGCACATGTACGACGAGACCCT GGGCAAGCTGCACTTCTGGCTGTCCTTCGTCGGCATGAACATGGCGTTCTTCCCCATGCACTTCGTGGGGCTGGCGGGCA TGCCGCGGCGGATCCCGGACTACAACCTGCAGTTCGCCGACTTCAACATGGTGTCCTCGATCGGTGCGTTCACCTTCGGC GCGACGCAGATCTTCTTCCTGTTCATCGTCATCAAGTGCATCCGCGGCGGCAAAGCGGCTCCGGCCAAACCCTGGGAAGG TGCCGAAGGCCTGGAGTGGAGTATTCCCTCGCCGGCGCCGTACCACACCTTTGTCACCCCGCCGGAAGTGAAATGA Protein sequence : MSAVIDDHGHAGHDDHAHGPAKGLMRWVLTTNHKDIGTLYLWFSFCMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTT MHGLVMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLISTLFMPGGGPNFGWTFYAPLSTTYAPE SVTFFIFAIHLMGVSSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFS AAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPTFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPLVGE LFFMYATLLIAVPTGVKVFNWVSTMWQGSLTFETPMLFAVAFVILFTIGGFSGLMLAIAPADFQYQDTYFVVAHFHYVLV PGAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFTFG ATQIFFLFIVIKCIRGGKAAPAKPWEGAEGLEWSIPSPAPYHTFVTPPEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 2e-98 | 48 |
