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Name : rph (PFL_6059) Accession : YP_263117.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 6880342 - 6881064 bp Length : 723 bp Strand : - Note : identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 DNA sequence : ATGAAACGTCCAAGTGGTCGCGCCGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAACACGCCGAGGG ATCTGTACTGGTCGAGTTCGGTGATACCAAAGTGATCTGCACGGTCAGCGTCGAGAACGGTGTGCCGCGCTTCCTCAAGG GCCAGGGCCAGGGTTGGCTGACTGCCGAGTACGGCATGCTGCCGCGGGCTACCGGCGAGCGTAACCAGCGCGAAGCCAGC CGTGGCAAGCAGGGCGGTCGGACCCTGGAGATCCAGCGTCTGATCGGCCGTTCGCTGCGCGCTGCGCTGGACATGTCCAA GCTGGGCGACGTCACCCTGTATGTCGATTGCGACGTGATCCAGGCCGACGGCGGTACTCGTACCGCATCGATCACTGGCG CCATGGTGGCCCTGGTCGACGCCTTGAAAGTGATCAAGAAGCGCGGTGGCCTGAAAGGCGGCGATCCGCTGAAGCAGATG ATTGCCGCGGTATCCGTCGGCATGTACCAGGGCGAACCGGTCCTGGACCTGGATTATCTGGAAGACTCGGCTGCCGAAAC CGACCTCAACGTTGTGATGACCAGCACCGGTGGTTTCATCGAAGTGCAGGGCACTGCCGAAGGTGCGCCGTTCCAGCCGG CTGAACTGAATGCGATGCTGGCCCTGGCCCAGCAAGGCATGAACGAGATTTTCCAACTGCAGCAAGCCGCGCTCGCCGAT TGA Protein sequence : MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRATGERNQREAS RGKQGGRTLEIQRLIGRSLRAALDMSKLGDVTLYVDCDVIQADGGTRTASITGAMVALVDALKVIKKRGGLKGGDPLKQM IAAVSVGMYQGEPVLDLDYLEDSAAETDLNVVMTSTGGFIEVQGTAEGAPFQPAELNAMLALAQQGMNEIFQLQQAALAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 8e-65 | 59 |
