|
Name : amtB (PFL_6019) Accession : YP_263077.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 6837647 - 6838984 bp Length : 1338 bp Strand : - Note : identified by similarity to SP:P69681; match to protein family HMM PF00909; match to protein family HMM TIGR00836 DNA sequence : ATGACTCTGCGTAAATTCGCAGGGCTAGGAGCCCTTTTGTCCCTCGTAATGCCAGGCCTGGCCATGGCGGCAGACGAAGC GGCGGCTCCAGTCCTCAACTCCGGCGATACCGCCTGGATGCTGACCTCCACAGCCCTGGTGCTGTTCATGACCATTCCTG GCCTGGCGCTGTTCTACGGCGGCATGGTGCGGTCGAAAAACATTCTTTCGGTAATGATGCAGTGCTTCGCCATTACCGGC CTGATCACTGTCCTGTGGTTCATCTATGGCTACAGCATGGCGTTCGACACCACCGGGATGGAAGCCGGCGTGGTCAACCT CAATTCCTTCGTGGGCGGCTTCTCCAAGGCCTTCCTGGCGGGCATCACCCCGGCCAGCCTGACCGGCCCGGCTGCGCTGT TCCCTGAAGCGGTGTTCGTCACCTTCCAGATGACCTTCGCCATCATCACTCCAGCGCTGATCGTCGGTGCCTTCGCCGAG CGGATGAAATTCTCCGCCATGCTGATCTTCATGGGCGTGTGGTTCACCCTGGTGTATGCGCCGATCGCCCATATGGTCTG GAGCGGTCCGGGCTCGCTGCTGGGCGACTGGGGCGTGCTGGACTTTGCCGGCGGCACCGTAGTGCACATCAACGCCGGTA TCGCGGGCCTGGTGGCCTGCCTGGTGCTGGGCAAGCGCAAGGGTTTCCCGACCACGCCGATGGCGCCACACAACCTGGGT TACACCCTGATGGGCGCAGCCATGCTGTGGATCGGCTGGTTCGGCTTCAACGCCGGTTCCGCCGCTGCCGCCAACGGCAC CGCCGGCATGGCCATGCTGGTAACGCAGATCGCGACGGCTGCCGCCGCCTTGGGCTGGATGTTTGCCGAGTGGATCACCC ACGGCAAGCCTAGCGCGCTGGGCATCGCTTCGGGTGTGGTCGCAGGCCTGGTGGCAATCACTCCGGCTGCCGGTACCGTT GGCCCGATGGGCGCCCTGATCATCGGTCTGGCGGCCGGTGTGGTGTGCTTCTTCTGCGCCACCAGCCTCAAGCGCAAGCT GGGATATGACGATTCCCTGGACGCCTTTGGCGTGCACGGCATCGGCGGTATTCTCGGTGCGATCCTCACCGGTGTGTTCG CTGCTCCGTCCCTGGGTGGCTTCGGCACCGTGACCGATGTTGCCGCTCAGGTCTGGATCCAGGCCAAGGGCGTGGGTTTC ACGGTGATCTACACCGCGATCGTCACCTTCATCATCCTCAAGGTTCTGGACGCGGTCATGGGGCTGCGGGTGAGCGAGGA AGAAGAGGCGGTCGGCCTCGATCTGGCACAACACAACGAGCGTGGTTACAACCTGTAA Protein sequence : MTLRKFAGLGALLSLVMPGLAMAADEAAAPVLNSGDTAWMLTSTALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITG LITVLWFIYGYSMAFDTTGMEAGVVNLNSFVGGFSKAFLAGITPASLTGPAALFPEAVFVTFQMTFAIITPALIVGAFAE RMKFSAMLIFMGVWFTLVYAPIAHMVWSGPGSLLGDWGVLDFAGGTVVHINAGIAGLVACLVLGKRKGFPTTPMAPHNLG YTLMGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSALGIASGVVAGLVAITPAAGTV GPMGALIIGLAAGVVCFFCATSLKRKLGYDDSLDAFGVHGIGGILGAILTGVFAAPSLGGFGTVTDVAAQVWIQAKGVGF TVIYTAIVTFIILKVLDAVMGLRVSEEEEAVGLDLAQHNERGYNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 1e-80 | 56 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 1e-80 | 56 |
