|
Name : argH (PFL_6004) Accession : YP_263062.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : argininosuccinate lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0165 EC number : 4.3.2.1 Position : 6824533 - 6825927 bp Length : 1395 bp Strand : + Note : identified by similarity to SP:P50987; match to protein family HMM PF00206; match to protein family HMM TIGR00838 DNA sequence : ATGAGCACTGACAAGACCAATCAGTCCTGGGGCGGCCGCTTCAGTGAACCCGTCGACGCCTTCGTCGCCCGCTTCACCGC CTCTGTCACTTTCGACCAGCGCCTGTATCGCCATGACATCATGGGCTCGATCGCCCACGCCACGATGCTGGCCAAGGTCG GCGTGCTCACCGACGCCGAGCGTGACAGCATCATCGACGGCCTGAAGACCATCCAGGGCGAGATCGAGGCCGGCAGTTTC GACTGGCGCGTGGACCTCGAAGACGTGCACATGAACATCGAAGCGCGCCTGACCGACCGCATCGGCATCACCGGCAAGAA ACTGCACACCGGCCGCAGCCGCAACGACCAGGTGGCCACCGACATCCGCCTGTGGCTGCGGGACGAGATCGACCTGATCC TCGGTGAAATCACCCGCCTGCAAAAAGGCCTGCTGGAGCTGGCCGAGCGTGAAGCCGAGAGCATCATGCCGGGCTTCACC CACTTGCAGACCGCCCAACCGGTGACCTTCGGCCACCACATGCTGGCCTGGTTCGAGATGCTCAGCCGTGACTACGAGCG CCTGGTGGACTGCCGCAAGCGCACCAACCGCATGCCCCTGGGCAGCGCCGCGCTGGCCGGCACCACCTACCCGATCGACC GCGAGCTGACCTGCCAGTTGCTGGGCTTCGAAGCCGTGGGCGGCAACTCCCTGGACAGCGTTTCGGACCGGGACTTCGCC ATTGAATTCTGCGCCGCCGCCAGCGTGGCGATGATGCACCTGTCGCGGTTTTCCGAAGAGCTGGTGCTGTGGACCAGCGC GCAATTCCAGTTCATCGACCTGCCGGACCGCTTCTGCACCGGCAGCTCGATCATGCCGCAAAAGAAAAACCCCGACGTGC CGGAACTGGTACGGGGCAAGAGCGGCCGGGTATTCGGCGCGCTGATGGGCCTATTGACCCTGATGAAAGGCCAGCCCCTG GCCTACAACAAGGACAACCAGGAAGACAAGGAACCACTGTTCGACGCCGCCGATACCCTGCGCGATTCGCTGCGGGCCTT CGCCGACATGATCCCGGCCATCAAGCCCAAGCACGCCATCATGCGCGAGGCGGCCCTGCGCGGTTTTTCCACCGCCACCG ACCTGGCGGACTACCTGGTACGCCGTGGCCTGCCGTTCCGCGACTGTCACGAAATCGTCGGCCATGCGGTGAAGTACGGC GTGGAAACCGGCAAGGACCTGGCGGAAATGAGCCTGGAAGAGCTGCGCAAGTTCAGCGACCAGATCGAACAGGACGTGTT CGCCGTGCTGACCCTGGAAGGCTCGGTGAATGCCCGTAACCACATCGGCGGCACCGCACCGGCCCAGGTCCGGGCGGCAG TGGCCCGCGGCCAGGCCCTGCTGGCCAGCCGCTAA Protein sequence : MSTDKTNQSWGGRFSEPVDAFVARFTASVTFDQRLYRHDIMGSIAHATMLAKVGVLTDAERDSIIDGLKTIQGEIEAGSF DWRVDLEDVHMNIEARLTDRIGITGKKLHTGRSRNDQVATDIRLWLRDEIDLILGEITRLQKGLLELAEREAESIMPGFT HLQTAQPVTFGHHMLAWFEMLSRDYERLVDCRKRTNRMPLGSAALAGTTYPIDRELTCQLLGFEAVGGNSLDSVSDRDFA IEFCAAASVAMMHLSRFSEELVLWTSAQFQFIDLPDRFCTGSSIMPQKKNPDVPELVRGKSGRVFGALMGLLTLMKGQPL AYNKDNQEDKEPLFDAADTLRDSLRAFADMIPAIKPKHAIMREAALRGFSTATDLADYLVRRGLPFRDCHEIVGHAVKYG VETGKDLAEMSLEELRKFSDQIEQDVFAVLTLEGSVNARNHIGGTAPAQVRAAVARGQALLASR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00324 | YP_008207789.1 | Argininosuccinate lyase | Not tested | AbaR25 | Protein | 2e-171 | 79 |
| BJAB0868_00328 | YP_008211654.1 | Argininosuccinate lyase | Not tested | AbaR26 | Protein | 2e-171 | 79 |
