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Name : cadA_1 (PFL_5892) Accession : YP_262950.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Resistance Product : cadmium-exporting ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.3 Position : 6701491 - 6703830 bp Length : 2340 bp Strand : - Note : identified by similarity to GB:AAK48831.1; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525 DNA sequence : ATGAGCGATTCTCTCCACAGCCCGCGCAAAACCGCGGATCAGCAGCCCCAGGCTGATCACGATCACGATCACGATCACGA TCACGATCACAGCCATGGCCACAGCCATTCCCATGCGCACGCGGGCAAGCTGCAGCCGGTCAAGGCACACGATCATGCCG CCCATGGCGCTTCCTGCTGCGGTTCCGCCGGCCTGGCGCCGTCCAGGGTCACCCTGAGCGAGACCCCGACCGCCGGCGCG CGCTTGAGCAGCTTTCGCATCGAAGCCATGGACTGCCCCACCGAACAGACCCTGATCCAGAACAAGCTGGGCAAGTTGGC CGGGGTCCAGGCGCTGGAGTTCAACCTGATGAACCGCGTGCTGGGGGTGACCCACGACCTGCCGAGCACCGCGCCTATCA TCGAGGCGGTCAAGTCACTGGGCATGCACGCCGAACCCCTGGAACAGGAGGGTGACCAAGCCGCGCCTGCCGCAGCGCCC GTGAAGAAGCCCTGGTGGCCGCTGGCCCTGTCCGGTATCGGCGCGCTGGCTGCCGAGGTCATCCATTTCACCAATGCCGC GCCCGACTGGGTGATTGCCCTGGTGGCCCTGGTGTCGATCCTCAGTGGTGGCCTGACCACCTACAAGAAGGGCTGGATCG CCCTGAAGAACCGCAACCTCAACATCAATGCCCTGATGAGCATCGCCGTGACCGGCGCCGTGCTGATCGGCCAATGGCCG GAAGCGGCGATGGTGATGTTCCTGTTCACCGTGGCGGAATTGATCGAGGCCCGTTCCCTGGATCGGGCGCGCAACGCCAT CAGCGGCCTGATGCAGATGACCCCGGAACGGGTCACGGTGCAGCAGGCAGACGGCAACTGGAGCGAACAGGAAGCGAAAA ACGTCGAACTTGGCGCACTGGTGCGGGTGCGTCCCGGCGAGCGCATCGGCCTCGACGGCGAGGTCGTGTCCGGCAACTCC ACCATCGACCAGGCGCCGATCACCGGTGAAAGCCTGCCGGTGGAAAAGACTGTGGGCGACAAGGTTTTCGCCGGCACCAT CAACCAGGCCGGCTCCCTGGAATACCGAGTGACTGCCGCCGCCAACAACTCGACCCTGGCGCGGATCATCCACGCTGTGG AACAGGCCCAGGGCGCCCGGGCTCCGACCCAGCGCTTCGTTGACAGCTTCTCGAAAATCTACACCCCGGCGGTATTCGCC TTCGCCCTGGCGGTGGCGCTGATTCCGCCGCTATTCATGGGCGGCGTCTGGTTCGACTGGATCTACCGCGCCCTGGTGCT GCTGGTAGTGGCTTGCCCCTGCGCCCTGGTGATCTCCACCCCGGTGAGCATTGTCAGCGGCCTGGCGGCTGCCGCGCGCA AGGGCATCCTGGTCAAGGGCGGGGTCTACCTGGAAGGCGGCTACAAGCTCGACTACCTGGCCCTGGACAAGACCGGCACC ATCACCCACGGCAAACCGGTGCAGACCGACTTCCTGTCCCTGGACCCGCTGGCCCAGGACACCGCCCCGGCCCTGGCCGC AAGCCTGGCAGGGCGTTCCGACCACCCGGTGTCCCTGGCCATTGCCCAGGCGGCTGTGGATAAACAGTTGGCCATGCACC CTGTGGATAACTTCGAGGCCCTGACCGGCCGAGGCGTACGCGGCGAGATCAATGGCGAGCTGTACCACCTGGGCAACCAT CGTCTGGTGGAAGAGCTGGGCCTGTGCTCCCCGGCTTTGGAAGAAAAACTCTTCGCCCTGGAGAAGCAGGGCAAGACCGT GGTCCTGCTGCTGGACCGCAATGGCCCGCTGGCGCTGTTCGCCGTGGCCGATACGGTGAAGGAATCCAGCCGCGAAGCCA TCCAGCAATTGCATGAGCTGGGGATCAAGACCCTGATGCTCACCGGCGACAACCCGCATACCGCCCAGGCCATCGCGGCC CAGGTGGGTATCGACCAGGCCCGGGGCGACCTGCTGCCCACCGACAAGCTGCAGGCCATCGAAGACCTGTACGCCCAGGG CCACCGGGTGGGCATGGTGGGCGACGGCATCAACGACGCCCCGGCCCTGGCCCGTGCCGAAATCGGTTTCGCCATGGCTG CGGCGGGCACCGACACTGCCATCGAGACCGCGGATGTGGCCCTGATGGACGATGATCTGCGCAAGATCCCGGCGTTTATC CGCCTGTCGCGCCAGACCTCGGTGGTGCTCAAGCAAAATATCGTCCTGGCCCTGGTCATCAAGGCGATCTTTCTTGGGGT AACCTTTGCCGGGCTTGCCACCATGTGGATGGCAGTATTCGCCGACATGGGCGTGAGCCTGTTGGTGGTGTTCAACGGTC TGCGCCTGCTGCGCAAATAA Protein sequence : MSDSLHSPRKTADQQPQADHDHDHDHDHDHSHGHSHSHAHAGKLQPVKAHDHAAHGASCCGSAGLAPSRVTLSETPTAGA RLSSFRIEAMDCPTEQTLIQNKLGKLAGVQALEFNLMNRVLGVTHDLPSTAPIIEAVKSLGMHAEPLEQEGDQAAPAAAP VKKPWWPLALSGIGALAAEVIHFTNAAPDWVIALVALVSILSGGLTTYKKGWIALKNRNLNINALMSIAVTGAVLIGQWP EAAMVMFLFTVAELIEARSLDRARNAISGLMQMTPERVTVQQADGNWSEQEAKNVELGALVRVRPGERIGLDGEVVSGNS TIDQAPITGESLPVEKTVGDKVFAGTINQAGSLEYRVTAAANNSTLARIIHAVEQAQGARAPTQRFVDSFSKIYTPAVFA FALAVALIPPLFMGGVWFDWIYRALVLLVVACPCALVISTPVSIVSGLAAAARKGILVKGGVYLEGGYKLDYLALDKTGT ITHGKPVQTDFLSLDPLAQDTAPALAASLAGRSDHPVSLAIAQAAVDKQLAMHPVDNFEALTGRGVRGEINGELYHLGNH RLVEELGLCSPALEEKLFALEKQGKTVVLLLDRNGPLALFAVADTVKESSREAIQQLHELGIKTLMLTGDNPHTAQAIAA QVGIDQARGDLLPTDKLQAIEDLYAQGHRVGMVGDGINDAPALARAEIGFAMAAAGTDTAIETADVALMDDDLRKIPAFI RLSRQTSVVLKQNIVLALVIKAIFLGVTFAGLATMWMAVFADMGVSLLVVFNGLRLLRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C97 | AAN62190.1 | putative metal-transporting P-type ATPase | Not tested | PAGI-2(C) | Protein | 0.0 | 68 |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 5e-113 | 46 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 2e-112 | 46 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 2e-112 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA_1 | YP_262950.2 | cadmium-exporting ATPase | BAC0298 | Protein | 0.0 | 68 |
| cadA_1 | YP_262950.2 | cadmium-exporting ATPase | BAC0461 | Protein | 1e-76 | 42 |
