Gene Information

Name : rdgB (PFL_5845)
Accession : YP_262903.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : dITP/XTP pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : 3.6.1.15
Position : 6651903 - 6652496 bp
Length : 594 bp
Strand : +
Note : identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042

DNA sequence :
ATGAACCTCACGCAACTCGTACTGGCCAGCCATAACGCCGGCAAACTCAAAGAACTCCAGGCCATGCTCGGCGCTTCGGT
GCAATTGCGCTCGATCGGCGAGTTCAGCAGCGTCGAGCCGGAAGAAACCGGCCTGTCGTTCGTCGAAAACGCCATCCTCA
AGGCGCGTAATGCCGCACGCATTTCCGGCTTGCCGGCACTGGCCGACGACTCCGGCCTGGCAGTGGACTTCCTCGGTGGC
GCCCCGGGCATCTACTCGGCCCGCTACGCCGACGGCCAGGGCGACGCGGCGAACAACGCCAAGCTGCTCGAAGCCCTCAA
GGATGTCCCGCAAGCCGAGCGCGGTGCGCAGTTCGTCTGCGTCCTGGCACTGGTACGGCACGCCGACGATCCGCTGCCGA
TCCTCTGCGAAGGCCTGTGGCACGGGCGCATCCTTACCGCCGCCAGCGGCGAGCACGGCTTCGGCTACGACCCGCTGTTC
TGGGTGCCGGAACGCAACTGCTCCAGCGCCGAACTGGGCCCCGAGGAGAAAAACCAGCTCAGCCACCGCGCCCGCGCCAT
GGCCATTCTGCGGCAACGCCTGGGCCTGAAATGA

Protein sequence :
MNLTQLVLASHNAGKLKELQAMLGASVQLRSIGEFSSVEPEETGLSFVENAILKARNAARISGLPALADDSGLAVDFLGG
APGIYSARYADGQGDAANNAKLLEALKDVPQAERGAQFVCVLALVRHADDPLPILCEGLWHGRILTAASGEHGFGYDPLF
WVPERNCSSAELGPEEKNQLSHRARAMAILRQRLGLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 7e-24 47