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Name : betB (PFL_5767) Accession : YP_262825.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 6568803 - 6570275 bp Length : 1473 bp Strand : + Note : identified by similarity to SP:P17445; match to protein family HMM PF00171; match to protein family HMM TIGR01804 DNA sequence : ATGGCCCGTTTCGAACTGCAAAAACTCTACATCGACGGCGGCTACACCGATGCCGGCAGCGACGCCACTTTCGATGCCAT CAACCCGGCCAACGGTGAAGTTCTCGCACAAGTGCAGCGTGCGACCAAGGAAGACGTTGAACGCGCCGTGGTCAGCGCCG AGAAAGGCCAGAAGATCTGGGCCGCCATGACCGCCATGGAGCGTTCGCGCATCCTGCGTCGCGCCGTGGAAATCCTCCGC GAGCGCAACGACGAACTGGCCGCCCTGGAAACCCTGGACACCGGCAAGGCCTTCTCCGAAACCAAGTACGTGGACATCGT CACCGGCGCCGACGTGCTGGAATACTACGCAGGCCTGGTACCGGCCATCGAAGGCGAGCAGATCCCGCTGCGCACCACTT CCTTCGTCTACACCCGTCGCGAGCCCCTGGGCGTAGTGGCCGGTATCGGCGCGTGGAACTACCCGATCCAGATCGCCCTG TGGAAATCCGCTCCAGCCCTGGCGGCCGGTAACGCGATGATCTTCAAACCGAGCGAAGTGACCTCGCTGACCACCCTGAA ACTGGCCGAGATCTACACCGAAGCCGGCCTGCCGGATGGCGTGTTCAACGTCCTGACCGGCAGCGGCCGCGAAGTCGGCA CCTGGCTGACCGAGCACCCGCGCATCGAGAAGGTCTCCTTCACCGGCGGCACCGACACTGGCAAGAAAGTCATGGCCAGC GCTTCCAGCTCCTCGCTGAAAGACGTGACCATGGAACTGGGCGGCAAGTCGCCACTGATCATCTTCGACGACGCCGACCT GGATCGCGCCGCCGACACCGCCATGATGGCCAACTTCTACAGCTCCGGTCAGGTCTGCACCAACGGCACTCGGGTATTCG TACCGAGCCACCTGAAAGCCGCTTTCGAAGCCAAGATCGCCGAGCGCGTTGCGCGCATCCGCATCGGCAACCCGGAAGAC GAAAACACCAACTTCGGCCCGCTGGTCAGTTTCCCGCACATGGAAAGCGTGCTGGGCTACATCGCCAAGGGTAAAGAAGA AGGTGCCCGCGTACTGTGCGGCGGCGAGCGCCTGACCGACGGCGAATTCGCCAAGGGCGCCTTCGTTGCACCGACCGTGT TCACCGACTGCACCGACGACATGACCATCGTCCGTGAAGAAATCTTCGGCCCGGTCATGGCGATCCTGACCTACGAAACC GAAGAAGAAGTGATCCGCCGCGCCAACGACACCGACTTCGGCCTGGCTGCCGGCCTGGTCACCAAGGATCTGAACCGCGC TCACCGCGTGATTCATCAGCTCGAAGCCGGTATCTGCTGGATCAACGCCTGGGGCGAGTCCGACGCCAAGATGCCGGTTG GCGGCTACAAGCAGTCGGGCGTGGGCCGTGAGAACGGCATCAGCTCGCTGAACAACTTCACCCGCATCAAGTCGGTGCAG GTCGAGCTGGGCGACTACGCCTCGGTGTTCTAA Protein sequence : MARFELQKLYIDGGYTDAGSDATFDAINPANGEVLAQVQRATKEDVERAVVSAEKGQKIWAAMTAMERSRILRRAVEILR ERNDELAALETLDTGKAFSETKYVDIVTGADVLEYYAGLVPAIEGEQIPLRTTSFVYTRREPLGVVAGIGAWNYPIQIAL WKSAPALAAGNAMIFKPSEVTSLTTLKLAEIYTEAGLPDGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTDTGKKVMAS ASSSSLKDVTMELGGKSPLIIFDDADLDRAADTAMMANFYSSGQVCTNGTRVFVPSHLKAAFEAKIAERVARIRIGNPED ENTNFGPLVSFPHMESVLGYIAKGKEEGARVLCGGERLTDGEFAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILTYET EEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSVQ VELGDYASVF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 5e-72 | 41 |
