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Name : PFL_5639 (PFL_5639) Accession : YP_262698.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : polyamine ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : 3.6.3.31 Position : 6422158 - 6423282 bp Length : 1125 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF08402; match to protein family HMM TIGR01187 DNA sequence : ATGAGCGAGGTCGTTTCAAGTGCTGGGGCCAACGATGTTCTGGTCAGCTTTCGTGGTGTGCAGAAGAGCTACGACGGCGA GAACCTGATCGTCAAAGACCTCAACCTGGAAATTCGCAAAGGCGAGTTCCTCACCCTGCTGGGGCCGTCCGGTTCCGGCA AGACCACCAGCCTGATGATGCTGGCCGGTTTCGAAACCCCGACCGCCGGCGAGATCCAGCTGGCCGGGCGTTCGATCAAC AATGTGCCGCCGCACAAGCGCGACATCGGCATGGTGTTCCAGAACTACGCGCTGTTCCCCCACATGACCGTGGCCGAGAA CCTGGCCTTTCCGCTGTCGGTGCGCGGCCTCGGCAAGACCGACATCAGCGAGCGGGTCAAGCGCGTGCTGAGCATGGTCC AGCTCGACGCTTTCGCCCAGCGCTACCCGGCCCAGCTGTCCGGCGGCCAGCAGCAGCGGGTGGCCCTGGCCCGGGCCCTG GTGTTCGAGCCACAGCTGGTGCTGATGGACGAACCCCTTGGTGCCCTCGACAAGCAACTGCGCGAACACATGCAGATGGA GATCAAGCACCTGCACCAGCGCCTGGGCGTGACCGTGGTCTATGTGACCCACGACCAGGGCGAAGCCCTGACCATGTCCG ACCGGGTGGCGGTGTTCCACCAGGGCGAGATCCAGCAGATCGCGCCGCCGCGCACTCTCTACGAAGAACCGAAGAACACC TTCGTCGCCAACTTCATCGGCGAGAACAACCGCCTCAACGGCCGCCTGCACAGCCACAACGGCGAGCGTTGCGTGGTGGA GCTGGGGCGTGGCGAGAAGGTCGAGGCGCTGGCGGTGAATGTCGGCCAGGTCGGCGGCCCGGTGACCTTGTCCATCCGCC CGGAGCGGGTGAGCCTCAACGGTTCCAGCGAAAGCTGCGTCAACCGCTTCTCCGGCCGGGTGGCGGAATTCATCTATCTG GGCGACCACGTCCGGGTGCGCCTGGAAGTCTGCGGCAAGAGCGACTTCTTCGTGAAACAGCCGATTGCCGAGCTCGATCC TGCGCTGGCAGTGGGTGACGTGGTGCCGCTTGGCTGGCAAGTCGAGCACGTTCGCGCGCTCGACCCGCTTCTAGAGGCGA ATTGA Protein sequence : MSEVVSSAGANDVLVSFRGVQKSYDGENLIVKDLNLEIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEIQLAGRSIN NVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGLGKTDISERVKRVLSMVQLDAFAQRYPAQLSGGQQQRVALARAL VFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT FVANFIGENNRLNGRLHSHNGERCVVELGRGEKVEALAVNVGQVGGPVTLSIRPERVSLNGSSESCVNRFSGRVAEFIYL GDHVRVRLEVCGKSDFFVKQPIAELDPALAVGDVVPLGWQVEHVRALDPLLEAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFL_5639 | YP_262698.1 | polyamine ABC transporter ATP-binding protein | VFG1206 | Protein | 3e-41 | 43 |
