Gene Information

Name : rpsN (PFL_5569)
Accession : YP_262637.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : 30S ribosomal protein S14
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0199
EC number : -
Position : 6355968 - 6356273 bp
Length : 306 bp
Strand : -
Note : identified by match to protein family HMM PF00253

DNA sequence :
ATGGCCAAGAAGAGCATGAAGAACCGTGAGCTGAAGCGTCAGCTCACCGTTGCCAAGTACGCCACCAAGCGTGCAGCGCT
GAAAGCTATCATCGTGGATCTGAACGCAAGTCCAGAAGCTCGTTGGGAAGCTACCGTAGCTCTGCAGAAGCAGCCACGTG
ATGCAAGCGCTTCGCGCATGCGTAACCGCTGCCGCCTGACTGGTCGTCCGCACGGCGTTTACCGCAAGTTCGGCCTGGGC
CGTAACAAGCTGCGTGAAGCTGCAATGCGTGGTGACGTACCAGGTCTGGTTAAAGCCAGCTGGTAA

Protein sequence :
MAKKSMKNRELKRQLTVAKYATKRAALKAIIVDLNASPEARWEATVALQKQPRDASASRMRNRCRLTGRPHGVYRKFGLG
RNKLREAAMRGDVPGLVKASW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rpsN NP_814350.1 30S ribosomal protein S14 Not tested Not named Protein 1e-08 44
ef0103 AAM75306.1 EF0103 Not tested Not named Protein 9e-09 44