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Name : katA (PFL_5556) Accession : YP_262624.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : catalase KatA Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 6347245 - 6348693 bp Length : 1449 bp Strand : - Note : identified by similarity to SP:O52762; match to protein family HMM PF00199 DNA sequence : ATGAGCCAGACCAAAACTCTTACTACCGCAAGTGGCGCTCCTGTCGCTGATAACCAGAACTCTCGTTCCGCCGGCCCCCG GGGCCCTCTGCTTCTCGACGATTTTCACCTGATCGAAAAGCTCGCCCATTTCAACCGCGAGAATATTCCCGAGCGTCGCG TGCACGCCAAGGGTTCAGGCGCCTATGGCACTTTCACCGTTTCTCGTGATATCACCGAATACACCAGCGCCAAGTTGTTT GAGGCGGTAGGCAAGAAGACTCCGACCTTCCTGCGTTTTTCCACGGTAGGCGGCGAGCGTGGTTCGGCAGACACCGAGCG GGACCCACGCGGCTTTGCCCTCAAGTTCTACACCGAAGAAGGCAACTGGGACATCGTAGGCAACAACACCCCGGTGTTCT TCATTCGCGACCCGCTGAAGTTTCCCGACTTTATCCACACCCAGAAGCGCCTGCCCCAGAGCAATCTGAAAAGTGCCCAG ATGATGTGGGATTTCTGGTCCCATTCGCCCGAGGCGCTGCACCAGGTAACCATTCTGTTTTCCGATCGGGGTATTCCGGA TGGCTACCGCCACATGCATGGCTTTGGCAGCCACACCTACAGCCTGATCAACGCCAAGGGTGAGCGGCACTGGGTCAAGT GGCACTACAAGACCAAGCAGGGCATCAAGAACCTGGCGCCGGCTGACGCAGCGCGCCTGGCCGGTACCGATCCTGATTAC GCCCAGCGCGACCTGTTCAATGCGATCGAGCGCGGTGAGTTTCCGAAATGGAGCGTGTGCATCCAGGTCATGACCGAAGC TCAAGCCGCCGCGCATTACGAGAACCCCTTCGATGTGACCAAGACCTGGTCGCAGAAAGAGTTCCCGTTGATCGAAGTGG GTGAGCTGGAACTGAATCGCAACCCGTTGAATTACTTTGCAGAGGTCGAGCAGGCTGCATTCGGCCCTAGCAACATGGTA CCTGGGGTAGGTCTTTCGCCGGACCGCATGCTGCAAGGCCGGGTATTCGCATACGCCGACGCGCATCGCTACCGTGTGGG TACCAACCACCAACAGTTGCCGGTGAACGCTCCATTGAGCCCGGTGAACAGCTACCAGCGCGACGGCTCCATGGCTTTCG GTAGCAATGGTGGTGCGGCGCCTAACTACGAGCCCAACAGCTATGGCGATGCGCCGAAGCAGGCTCCCCGTTATGCCGAG CCGGCCCTGGCACTCAGCGGTGCTGCGGACCGCTACGATCATCGTGAAGACGCCGACTACTACAGCCACGCTGGTGCGTT GTTCCGCCTGATGAACGATGAGCAGAAGGCATTGCTGATCAATAACATCGTGGGCGCCATGGCTGGAGTGGCGGCTGATG TGGTTGATCGGCAGTTGCAGCATTTCTACAAGGCCGACCCGGCTTACGGCGAAGGCATCGCCAAAGCTTTGGGCGTATCG CTCAAGTAA Protein sequence : MSQTKTLTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAYGTFTVSRDITEYTSAKLF EAVGKKTPTFLRFSTVGGERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQ MMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERHWVKWHYKTKQGIKNLAPADAARLAGTDPDY AQRDLFNAIERGEFPKWSVCIQVMTEAQAAAHYENPFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMV PGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPLSPVNSYQRDGSMAFGSNGGAAPNYEPNSYGDAPKQAPRYAE PALALSGAADRYDHREDADYYSHAGALFRLMNDEQKALLINNIVGAMAGVAADVVDRQLQHFYKADPAYGEGIAKALGVS LK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-138 | 60 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 3e-109 | 52 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-104 | 50 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-104 | 50 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-104 | 50 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-104 | 50 |
