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Name : ribD_2 (PFL_5522) Accession : YP_262590.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 6304545 - 6305678 bp Length : 1134 bp Strand : - Note : identified by similarity to SP:P25539; match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGAACCAGCCTGCCGAGCAAGCGGTCCTCGACGCCCACTACATGGCCCGTGCTCTGGAACTGGCGCGCAAGGGCCGCTA CTCCACCCATCCCAACCCGCGTGTCGGCTGCGTCATCGTGCGCGACGGCCAGGTGGTGGGCGAGGGCTGGCACGTGCGGG CCGGCGAGCCCCATGCCGAGGTGCATGCCCTGCGCGCGGCCGGTGAACTGGCCCGTGGCGCCACCGCCTATGTGACCCTC GAACCCTGCAGCCATCACGGGCGTACGCCGCCCTGCGCCGACGCCCTGGTGAATGCCGGTGTGGCACGGGTGGTCGCGGC CATGCAGGACCCCAACCCGGAAGTGGCCGGCCGTGGCTTGCAGCGCCTGGCCCAGGCCGGCATCGACACCCATGGCGGTG TGCTGGAAGGCGAGGCGCGGGCGATCAATAAAGGCTTTCTGAAACGCATGGAGCACGGCTTGCCTTATGTGCGGGTCAAG CTGGCCATGAGCCTGGATGGCCGCACCGCCATGGCCAGTGGCGAGAGCCAGTGGATCACTGGCCCTGCGGCGCGCTCTGC AGTGCAGCGCCTGCGGGCCGAGTCCAGCGTGGTACTGACCGGCGCCGACACGGTGCTGGCGGACGACGCGCGGCTGACCG TGCGCGCCGCCGAACTGGGCCTGGATGCCGAGCAGACCGCCCTGGCCATGAGCCGGCCGCCGCTGCGGGTGCTGATCGAC GGCCGCCTGCGGGTGCCTCTGGATGCGCCATTCTTCAAGGCAGGCCCAGCGTTGGTTGCCACTTGTGCGGCGGTGGAAGA GCAATACGCCAACGGCCCGGAATGCCTGATTGTTCCCGGCCCCGATGGCCAGGTGGATCTGCGTCGCCTGCTGTTGGAGC TGGCGGCCCGTGGGGTCAACGAAGTGCTGGTGGAAGCCGGCCCACGCCTGGCCGGGGCCTTTGCCCAGCAGGGCCTGGTG GACGAGTACCAGATATTCGTCGCCGGCAAGTTCCTCGGCTCCTCTGCGCGGCCGTTGCTGGACTGGCCGCTGGCGCAGAT GAGCCAGGCGCCATTGCTGAAGATCATAGAAATGCGTGCGGTGGGCGATGACTGGCGAGTCACTGCCATCCCGGCCCCGC CAGCGAGCGTATAA Protein sequence : MNQPAEQAVLDAHYMARALELARKGRYSTHPNPRVGCVIVRDGQVVGEGWHVRAGEPHAEVHALRAAGELARGATAYVTL EPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGLQRLAQAGIDTHGGVLEGEARAINKGFLKRMEHGLPYVRVK LAMSLDGRTAMASGESQWITGPAARSAVQRLRAESSVVLTGADTVLADDARLTVRAAELGLDAEQTALAMSRPPLRVLID GRLRVPLDAPFFKAGPALVATCAAVEEQYANGPECLIVPGPDGQVDLRRLLLELAARGVNEVLVEAGPRLAGAFAQQGLV DEYQIFVAGKFLGSSARPLLDWPLAQMSQAPLLKIIEMRAVGDDWRVTAIPAPPASV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-57 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-57 | 49 |
