|
Name : PFL_5469 (PFL_5469) Accession : YP_262537.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.- Position : 6239206 - 6240726 bp Length : 1521 bp Strand : + Note : identified by similarity to GB:BAA24014.1; match to protein family HMM PF00171 DNA sequence : ATGCGTTACGCACACCCCGGTACTGAAGGCGCTATCGTTTCGTTCAAGAGCAAATACGGTAACTACATCGGCGGCGAGTT CGTCGCGCCTGTCAAAGGCCAGTACTTCACCAACACCTCGCCGGTCAACGGCCAGCCGATTGCCGAATTCCCCCGCTCCA CTGCCGAAGACATCGACAAGGCCCTGGACGCCGCCCATGCCGCCGCTGACGCCTGGGGCGCGACCTCGGTGCAGGCGCGC TCGCTGATCCTGCTGAAGATTGCCGACCGCATCGAACAGAACCTCGAACTGCTGGCCATCACCGAAACCTGGGACAACGG CAAGGCCGTGCGCGAAACCCTGAACGCCGACATTCCCCTGGCCGCCGACCACTTCCGCTACTTCGCCGGTTGCCTGCGGG CCCAGGAAGGCAGCGCTGCGGAAATCGACGGCAACACCGTGGCCTATCACATCCATGAACCCCTGGGCGTGGTCGGGCAG ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAACTCGCCCCGGCCCTGGCAGCGGGCAACTGCGTGGTACT CAAGCCCGCCGAGCAGACCCCGCTGGGCATCACCGTGCTCATGGAAGTGATCGGCGACCTGCTGCCACCCGGCGTACTCA ACGTGGTGCAAGGTTTTGGCCGCGAAGCCGGCGAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC TCGACTCCGGTGGGCTCGCACATCATGAAGTGCGCCGCCGAGAACATCATTCCGTCCACCGTGGAGCTGGGCGGCAAGTC GCCGAACATCTTCTTCGAAGACATCATGCAGGCCGAGCCCAAGTTCATCGAAAAGGCCGCCGAAGGCCTGGTGCTGGCAT TCTTCAACCAGGGTGAAGTCTGCACCTGCCCATCCCGCGCCCTGGTGCAGGAATCGATCTACGACGAATTCATGCAAGTG GTGATGAAGAAGATCGAGCAGATCAAGCGTGGCGACCCACTGGACACCGACACCATGGTCGGCGCCCAGGCTTCCGAGCA GCAGTTCGACAAGATCCTCTCCTACCTCGACATCGCCAAGAACGAAGGTGCGCAGCTGCTCACCGGCGGCAAGGTGGAAA AACTCGAGGGCGACCTGTCCAGCGGCTACTACATCCAGCCGACCCTGCTCAAGGGCACCAACAAGATGCGCGTGTTCCAG GAGGAAATCTTCGGCCCGGTGGTCAGCGTCACCACCTTCAAGGACGAAGCCGAAGCCCTGGCGATCGCCAACGACACCGA GTTCGGCCTGGGTGCCGGGGTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGCGGGATCAAGGCCGGCCGCG TCTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGTGGCTACAAGAAATCCGGCGTCGGCCGTGAAACC CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGCTGGGCTTCTTCTG A Protein sequence : MRYAHPGTEGAIVSFKSKYGNYIGGEFVAPVKGQYFTNTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGATSVQAR SLILLKIADRIEQNLELLAITETWDNGKAVRETLNADIPLAADHFRYFAGCLRAQEGSAAEIDGNTVAYHIHEPLGVVGQ IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLMEVIGDLLPPGVLNVVQGFGREAGEALATSKRIAKIAFTG STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPKFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYDEFMQV VMKKIEQIKRGDPLDTDTMVGAQASEQQFDKILSYLDIAKNEGAQLLTGGKVEKLEGDLSSGYYIQPTLLKGTNKMRVFQ EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET HKMMLDHYQQTKNLLVSYDINPLGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-148 | 66 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 6e-156 | 65 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 6e-156 | 65 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 6e-156 | 65 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-155 | 65 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 6e-54 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PFL_5469 | YP_262537.1 | aldehyde dehydrogenase | VFG0082 | Protein | 2e-148 | 66 |
