Gene Information

Name : PFL_5413 (PFL_5413)
Accession : YP_262481.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1432
EC number : -
Position : 6181406 - 6181885 bp
Length : 480 bp
Strand : -
Note : identified by match to protein family HMM PF01936

DNA sequence :
GTGAAGAAAATCGCTGTGTTCGCCGATGTCCAGAACCTCTACTACACCGTTCGTCAGGCCTATGGTTGCCACTTCAACTA
TGCGGCGCTGTGGGCGGATATCAGCAAGCAAGGGCAGATAGTCGAAGCCTATGCCTATGCCATCGACCGGGGTGACAGCA
AGCAACAGCAGTTCCAGCAGATCCTGCGCAACCTGGGCTTCACGGTCAAACTCAAGCCCTATATCCAGCGCAGCGACGGC
TCGGCCAAGGGCGACTGGGACGTGGGCATCACCATCGACATCATGGACGCTGCGGCCCATGTCGACGAAGTGGTGCTGGC
TTCCGGCGACGGTGATTTCGACCTGCTGCTGGAGCGCATCATCCACAAGCACGGGGTCAGTGCGGTGGCCTATGGCGTGC
CGGGGCTGACCGCCAATTCGCTGATTCGCGCGGCTACGCGCTATGTGCCGATCGAAGGCGCCTTGCTGCTTAAAAGCTGA

Protein sequence :
MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGDSKQQQFQQILRNLGFTVKLKPYIQRSDG
SAKGDWDVGITIDIMDAAAHVDEVVLASGDGDFDLLLERIIHKHGVSAVAYGVPGLTANSLIRAATRYVPIEGALLLKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1407 YP_001217351.1 hypothetical protein Not tested VPI-2 Protein 1e-39 55