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Name : thiC (PFL_0538) Accession : YP_257682.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 627925 - 629814 bp Length : 1890 bp Strand : + Note : identified by match to protein family HMM PF01964; match to protein family HMM TIGR00190 DNA sequence : ATGACTACAAAATTAAAAAACGCTAGCAACCTCAGTGAGTCGGCCCAAGTCGACCAACAATCGGTTCAGCCCTTTACCCG CTCGCAAAAAGTCTATGTCCAGGGTTCGCGCCCGGACATCCGCGTGCCCATGCGCGAAATCACCCTGGACGTGACCCCCA CCGACTTCGGCGGCGAGATCAACGCCCCGGTGACCGTGTACGACACCTCCGGCCCTTACACCGATCCGAACGTGGTGATC GATGTGCGCAAGGGCCTGGGCGATGTGCGTTCGGCGTGGATCGAGGACCGTGGCGACACCGAGCGTCTGGCGGGCCTGAG CTCCAACTTCGGCCAGCAGCGCCTGGCCGACCCGGAGCTGACCAAGCTGCGCTTCGCCCACGTCAACAACCCGCGCCGGG CCAAGGCCGGGGCCAACGTCAGCCAGATGCACTACGCGCGCAAAGGCATCATCACCGCCGAGATGGAATACGTCGCCATC CGCGAAAACATGAAGCTGCAAGAGGCCCGTGCCGCCGGCCTGCTGAAGCAGCAACACGCCGGCCACAGCTTCGGCGCCAG CATTCCGAAAGAAATCACCCCAGAGTTCGTCCGCGAGGAAATCGCCCGTGGCCGCGCCATCATCCCGGCCAACATCAACC ACGTCGAACTGGAACCGATGATCATCGGCCGCAACTTCCTGGTGAAGATCAACGGCAACATCGGCAACAGTGCCCTGGGT TCCTCGATCGAGGAAGAAGTGGCGAAACTGACCTGGGGCATCCGCTGGGGGTCGGACACGGTGATGGACCTGTCCACCGG CAAGCACATCCATGAAACCCGCGAGTGGATCATCCGCAACTCGCCGGTGCCGATCGGTACCGTACCGATCTACCAGGCCC TGGAAAAGGTCAACGGCGTGGCCGAGGACCTGACCTGGGAGCTGTTCCGCGACACCCTGATCGAGCAGGCCGAGCAGGGC GTGGACTACTTCACCATCCACGCAGGCGTCTTGCTGCGTTACGTGCCGCTGACCGCCAAGCGGGTCACCGGCATCGTGTC CCGGGGTGGCTCGATCATGGCCAAGTGGTGCCTGGCGCACCACAAGGAGAACTTCCTCTACACCCACTTCGACGAAATCT GCGAAATCATGAAGGCCTACGACGTCAGCTTCTCCCTGGGAGATGGCCTGCGCCCGGGGTCGATTGCCGACGCCAACGAC GAAGCCCAGTTCGGTGAACTGGAGACCCTCGGCGAGCTGACCAAGATCGCCTGGAAGCATGACGTGCAGTGCATGATCGA AGGCCCGGGCCACGTGCCGATGCAGTTGATCAAGGAGAACATGGACAAGCAGCTGGAGTGCTGCGACGAGGCGCCGTTCT ACACCCTGGGCCCGCTGACTACCGACATTGCCCCCGGCTACGACCACATCACCTCCGGTATCGGTGCGGCGATGATCGGC TGGTTCGGCTGCGCCATGCTCTGCTACGTCACGCCCAAGGAACACCTGGGCCTGCCGAACAAGGATGACGTGAAGACCGG GATCATCACCTACAAGATCGCCGCGCATGCTGCGGATCTGGCGAAAGGTCATCCGGGCGCGCAGATCCGCGACAACGCCT TGTCCAAGGCGCGTTTCGAGTTCCGCTGGGAAGACCAGTTCAACCTCGGCCTGGACCCGGACACGGCCCGCTCGTACCAC GACGAGACCCTGCCCAAGGATTCGGCCAAGGTCGCGCATTTCTGCTCCATGTGCGGGCCGAAGTTCTGCTCGATGAAGAT CACCCAGGAAGTGCGTGAGTACGCAGCCAACCAGCGTATCGAAGCGGTGGATGTGGATGTCGCCAAGGGCCTGGCGGAAC AGGCCGAGCGCTTCAAGCAGGAAGGCAGCCAGCTGTACAAGAAAGTCTGA Protein sequence : MTTKLKNASNLSESAQVDQQSVQPFTRSQKVYVQGSRPDIRVPMREITLDVTPTDFGGEINAPVTVYDTSGPYTDPNVVI DVRKGLGDVRSAWIEDRGDTERLAGLSSNFGQQRLADPELTKLRFAHVNNPRRAKAGANVSQMHYARKGIITAEMEYVAI RENMKLQEARAAGLLKQQHAGHSFGASIPKEITPEFVREEIARGRAIIPANINHVELEPMIIGRNFLVKINGNIGNSALG SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWELFRDTLIEQAEQG VDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADAND EAQFGELETLGELTKIAWKHDVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARSYH DETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRIEAVDVDVAKGLAEQAERFKQEGSQLYKKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 76 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 76 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 73 |
