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Name : lspA (PFL_5320) Accession : YP_262388.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : lipoprotein signal peptidase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0597 EC number : 3.4.23.36 Position : 6085349 - 6085861 bp Length : 513 bp Strand : - Note : identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077 DNA sequence : ATGCCTAACGCCGCAGGCCGTTTCGGCCGTCTGGGCTGGCTGTGGTTGAGCGTGCTGGTCCTGGTCATCGACCAGGTCAG CAAGCTGCACTTCGAAAGTTCGCTGAGCATGTACCAGCAGATCGTGGTGATCCCGGATTACTTCAGCTGGACCCTGGCCT ACAACACCGGCGCCGCCTTCAGCTTCCTCGCCGACGGCTCCGGCTGGCAGCGCTGGCTGTTCGCCCTGATCGCGATTGCG GTCAGTGCGGTGCTGGTAGTCTGGCTCAAGCGCCTGGGGCGCAATGAAACCTGGCTGGCCATCGCTCTGGCGCTGGTGCT GGGCGGGGCCCTGGGTAACCTGTACGACCGCATCGCCCTGGGCCATGTGATCGATTTCATCCTGGTGCACTGGCAGAACC GCTGGTACTTCCCGGCATTCAACTTCGCCGACAGTGCCATTACCGTTGGCGCGGTGATGCTGGCCCTGGATATGTTCAAG AGCAAGAAAACCGGAGAAGCCGTTCATGACTGA Protein sequence : MPNAAGRFGRLGWLWLSVLVLVIDQVSKLHFESSLSMYQQIVVIPDYFSWTLAYNTGAAFSFLADGSGWQRWLFALIAIA VSAVLVVWLKRLGRNETWLAIALALVLGGALGNLYDRIALGHVIDFILVHWQNRWYFPAFNFADSAITVGAVMLALDMFK SKKTGEAVHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lspA | AAN62189.1 | putative lipoprotein signal peptidase LspA | Not tested | PAGI-2(C) | Protein | 1e-05 | 44 |
