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Name : pilD (PFL_5289) Accession : YP_262361.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : type IV pilus prepilin peptidase PilD Function : - COG functional category : N : Cell motility COG ID : COG1989 EC number : - Position : 6058937 - 6059809 bp Length : 873 bp Strand : + Note : identified by similarity to SP:P22610; match to protein family HMM PF01478; match to protein family HMM PF06750 DNA sequence : ATGCCCCTGACTGACGCCCTCACTCTCTACCCCATGGCCTTCGTGGCTGCGGCCCTGGTATTGGGCCTGATCGTCGGCAG CTTTCTCAACGTGCTGGTGTGGCGCCTGCCGAAAATGCTCGAACGCGACTGGCGAGCCCAGGCCCGCGACGTGCTGGGGC TGGGGCCGGAACCTGTGGCTGCGCCCTATAACCTGATGCTGCCGCACTCCCAGTGCCCGCACTGTGCGCAGGCGATCCGC CCCTGGGAAAACATTCCGCTGCTCAGTTACCTGTGGCTGCGTGGCTGCTGCGCCCACTGCAATAGCTCCATCAGCCCGCG CTACCCGTTGACCGAACTGGCCTGCGGGCTGATCTCGGGTTTTATCGCCTGGCACTTCGGCTTCGGCTGGGCGGCCGGGC TGATGCTGATCCTCAGTTGGGGGCTGCTGGCAATGAGCCTGATCGACGCCGATCACCAGCTGCTGCCGGATGTGCTGGTG CTGCCACTGTTGTGGCTGGGGCTGATCGCCAACAGCTTCGGCCTGCTGATCAGCCTGGAGGATGCGCTGTGGGGGACGGT GATCGGCTACCTGTTCCTGTGGTCGGTGTTCTGGCTGTTCAAGCTGCTGACCGGCAAGGAGGGCATGGGCCACGGTGATT TCAAGCTGCTGGCCCTGTTCGGGGCCTGGGGCGGCTGGCAGATCCTGCCTCTGACCCTGCTGCTGTCATCCCTGTTGGGA GCGATTCTCGGCACGATCCTGCTGCGCCTGCGCCGGGAAAAGACCTCGACGCCAATCCCCTTTGGACCCTTTCTGGCCAT TGCCGGCTGGATTGCCTTGCTCTGGGGTGGTCAAATAACCGACTTCTATCTGCAGTTTGTCGGTTTCCAATGA Protein sequence : MPLTDALTLYPMAFVAAALVLGLIVGSFLNVLVWRLPKMLERDWRAQARDVLGLGPEPVAAPYNLMLPHSQCPHCAQAIR PWENIPLLSYLWLRGCCAHCNSSISPRYPLTELACGLISGFIAWHFGFGWAAGLMLILSWGLLAMSLIDADHQLLPDVLV LPLLWLGLIANSFGLLISLEDALWGTVIGYLFLWSVFWLFKLLTGKEGMGHGDFKLLALFGAWGGWQILPLTLLLSSLLG AILGTILLRLRREKTSTPIPFGPFLAIAGWIALLWGGQITDFYLQFVGFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85237.1 | putative prepilin peptidase A | Not tested | PAI V 536 | Protein | 2e-20 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilD | YP_262361.1 | type IV pilus prepilin peptidase PilD | VFG0114 | Protein | 8e-81 | 73 |
| pilD | YP_262361.1 | type IV pilus prepilin peptidase PilD | VFG2428 | Protein | 2e-36 | 49 |
| pilD | YP_262361.1 | type IV pilus prepilin peptidase PilD | VFG1882 | Protein | 4e-42 | 47 |
| pilD | YP_262361.1 | type IV pilus prepilin peptidase PilD | VFG0234 | Protein | 3e-36 | 46 |
