Gene Information

Name : PFL_5175 (PFL_5175)
Accession : YP_262253.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : polyamine ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 5936215 - 5937135 bp
Length : 921 bp
Strand : +
Note : identified by match to protein family HMM PF00528

DNA sequence :
ATGCACGCTTCTTCGATTTCCCAACACCTGGAACGGCGCAAGGCCCTGCGCAGCTTTCTCGGGGTCAGCCCGGCCCTGGT
CGCCATCGGCCTGTTCCTGATCGTGCCAATCCTTATCGTCATCGGCTATTCGTTGATGGAAGCCAACCCCTACGGCGGGG
TGAACAAGGTCTTCAGCAGCGACGCCTACACCTCCCTGCTGTTCGAACGGCAACTGGACGACAGCCTGGCCTTCGCCGAC
TCCTACCTGCTGATCGCCCTGCGCTCGATCGGCATCGCCGGGCTGACCACGGTGATCACCCTGCTGATCGGTTTTCCGGT
AGCGGTGTGGCTGGCCATGCAGCCAGTGCGGCGCCGCGGCCTGCTGATCTTCCTGATCACCGTGCCGTTCTGGGCCAACC
TGCTGATCCGCACCTACGCCTGGATCCTGCTGCTGCGCAACACCGGGGTGATCAACAACAGCCTGATGGGCCTGGGGGTC
ATCCACGAGCCGTTGCAGTTGCTGTACACCGACGGTGCGGTGCTGCTGGGGCTGGTCTACACCTACGCGCCCTTCGTGGT
GCTGCCGATCTACGCCACCCTGGAAAAGATGGACACCCGCCTGCTGGAAGCGGCCCAGGACCTCTACGCCGGACGCATTC
GGACCCTGCGCAAGGTGGTGCTGCCCATTGCCAAGCCGGGAATTTTCGCCGGGGCGATCCTGACTTTCGTGCCCTGCCTG
GGGGCGATGATCGCCCCGGAACTGCTGGGGGGCGGCACCCGGATGATGCTTGGCAACCTGATCTTCCGGCAGTTCAGCGA
TGCCCGTAACTGGCCCTTCGGCGCAGCCCTGTCGCTGGTGCTGATGGCCGCGGTGATGCTGGTACTGACCGTCTACGCCC
TGCGCGCCCAGCGCCAGAAAACCCTTCAGGAGGGTGCATGA

Protein sequence :
MHASSISQHLERRKALRSFLGVSPALVAIGLFLIVPILIVIGYSLMEANPYGGVNKVFSSDAYTSLLFERQLDDSLAFAD
SYLLIALRSIGIAGLTTVITLLIGFPVAVWLAMQPVRRRGLLIFLITVPFWANLLIRTYAWILLLRNTGVINNSLMGLGV
IHEPLQLLYTDGAVLLGLVYTYAPFVVLPIYATLEKMDTRLLEAAQDLYAGRIRTLRKVVLPIAKPGIFAGAILTFVPCL
GAMIAPELLGGGTRMMLGNLIFRQFSDARNWPFGAALSLVLMAAVMLVLTVYALRAQRQKTLQEGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 4e-38 41