Name : PFL_5175 (PFL_5175) Accession : YP_262253.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : polyamine ABC transporter permease Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 5936215 - 5937135 bp Length : 921 bp Strand : + Note : identified by match to protein family HMM PF00528 DNA sequence : ATGCACGCTTCTTCGATTTCCCAACACCTGGAACGGCGCAAGGCCCTGCGCAGCTTTCTCGGGGTCAGCCCGGCCCTGGT CGCCATCGGCCTGTTCCTGATCGTGCCAATCCTTATCGTCATCGGCTATTCGTTGATGGAAGCCAACCCCTACGGCGGGG TGAACAAGGTCTTCAGCAGCGACGCCTACACCTCCCTGCTGTTCGAACGGCAACTGGACGACAGCCTGGCCTTCGCCGAC TCCTACCTGCTGATCGCCCTGCGCTCGATCGGCATCGCCGGGCTGACCACGGTGATCACCCTGCTGATCGGTTTTCCGGT AGCGGTGTGGCTGGCCATGCAGCCAGTGCGGCGCCGCGGCCTGCTGATCTTCCTGATCACCGTGCCGTTCTGGGCCAACC TGCTGATCCGCACCTACGCCTGGATCCTGCTGCTGCGCAACACCGGGGTGATCAACAACAGCCTGATGGGCCTGGGGGTC ATCCACGAGCCGTTGCAGTTGCTGTACACCGACGGTGCGGTGCTGCTGGGGCTGGTCTACACCTACGCGCCCTTCGTGGT GCTGCCGATCTACGCCACCCTGGAAAAGATGGACACCCGCCTGCTGGAAGCGGCCCAGGACCTCTACGCCGGACGCATTC GGACCCTGCGCAAGGTGGTGCTGCCCATTGCCAAGCCGGGAATTTTCGCCGGGGCGATCCTGACTTTCGTGCCCTGCCTG GGGGCGATGATCGCCCCGGAACTGCTGGGGGGCGGCACCCGGATGATGCTTGGCAACCTGATCTTCCGGCAGTTCAGCGA TGCCCGTAACTGGCCCTTCGGCGCAGCCCTGTCGCTGGTGCTGATGGCCGCGGTGATGCTGGTACTGACCGTCTACGCCC TGCGCGCCCAGCGCCAGAAAACCCTTCAGGAGGGTGCATGA Protein sequence : MHASSISQHLERRKALRSFLGVSPALVAIGLFLIVPILIVIGYSLMEANPYGGVNKVFSSDAYTSLLFERQLDDSLAFAD SYLLIALRSIGIAGLTTVITLLIGFPVAVWLAMQPVRRRGLLIFLITVPFWANLLIRTYAWILLLRNTGVINNSLMGLGV IHEPLQLLYTDGAVLLGLVYTYAPFVVLPIYATLEKMDTRLLEAAQDLYAGRIRTLRKVVLPIAKPGIFAGAILTFVPCL GAMIAPELLGGGTRMMLGNLIFRQFSDARNWPFGAALSLVLMAAVMLVLTVYALRAQRQKTLQEGA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
potB | BAA36746.1 | - | Not tested | LIM | Protein | 4e-38 | 41 |