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Name : puuP (PFL_4897) Accession : YP_261978.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : putrescine:hydrogen symporter PuuP Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0531 EC number : - Position : 5639878 - 5641203 bp Length : 1326 bp Strand : - Note : identified by similarity to SP:P76037; match to protein family HMM PF00324 DNA sequence : ATGGCTCGCTTGCAACGCACCCTTTCATTGGGCGCGGTGGTGCTGTTCGGTATCGCTTACATGACGCCGATCATTGTCCT CGGCACCTTTGGCATCCTCGCCCAAACCACCGCTGGCATGGTGCCTGCAGCCTATCTGGCGGCGCTGGTGGCGATGTTCT TCACCGCCATGAGCTACGGGCGCATGGCCGCGGCGTTTCCCGTGGCCGGCTCGGCCTACAGCTATGTGCGCAAGGCCATC AGCCCCAAGCTGGGTTTCATCGCCGGCTGGGCGGTGCTGCTGGATTACCTGTTCCTGCCCATGGCCATCTGGCTGATCGG CGCCGCTTACCTGCATTCGGCGTTTCCCGGTGTACCGCAGTGGGTCTGGGTGCTGGCTTTCATCGGGGTGACCAGCGCGA TCAATATCGTTGGCCTGAAACTGGCCAACGGCATCAACGGCCTGCTGATGCTGGTGCAATTCCTGGTGCTGATCGCCTTT GTCGGCCTGTGCATCCACTACCTTGGTGGTGAGGCCGGGCGGCCGCTGTTCACCCTGGCGCCGTTCTTCAACGGGCAGAT GCACCTGCCGCTGATCATGAGCGGGGCGGCAATCGCCTGTTATTCATTCCTGGGCTTTGACGCGGTCAGCACCCTGACCG AGGAAACCCGCGACCCACGGCGGACCATTCCCCGGGCGATCATGCTGATTACCCTGGTGGGCGGGCTGATCTTTGTCGCG GTGTCCTACTTCGTCCAGGTTGCTCATCCGTCCTTCGAGTTCGCCGATGTGGATTCGGCGGCCTACGAGATTGCGCGCAA TATCGGCGGCGACCTGTTCGTCTCGATCTTCCTGATCGGGCTGATTGTCGGTCAGTTCGCCTCGGGGCTTTCGGCCCAGG CCAGCGGCTCGCGACTGCTGTTCGCCATGGGCCGCGACGGGGTCTTGCCCAAGCGCTTTTTCGGCAGCCTGCACGGGCGT TTCGGTACCCCGGTCAACAGCATCCTGCTGTGCGCCGTGGTGGCGTTGCTGGCATTGAAGCTGGATGTCACCACCTCGAC GTCCTTCATCAACTTCGGCGCCTTCCTGGCCTTCAGCCTGGTCAACCTGTCGGTGATCTTTCATTACTGGGTGGGGGGCC GGCAGCGTGGCCTGCGGGAGTTGATCCTGTTCCTGATCTTCCCCCTCATCGGTCTGGCGGCCGATCTGTGGCTGATGTCC AGCCTCGATCACCTGGCGATCTACCTGGGGGCGAGCTGGCTGGTTATTGGCCTGGTGTACCTGGGTTTCCTCACTCGCGG TTTCTCCCGCCAGCCTCCGGAAATGGATTTTCAGGAAGCGGCATAG Protein sequence : MARLQRTLSLGAVVLFGIAYMTPIIVLGTFGILAQTTAGMVPAAYLAALVAMFFTAMSYGRMAAAFPVAGSAYSYVRKAI SPKLGFIAGWAVLLDYLFLPMAIWLIGAAYLHSAFPGVPQWVWVLAFIGVTSAINIVGLKLANGINGLLMLVQFLVLIAF VGLCIHYLGGEAGRPLFTLAPFFNGQMHLPLIMSGAAIACYSFLGFDAVSTLTEETRDPRRTIPRAIMLITLVGGLIFVA VSYFVQVAHPSFEFADVDSAAYEIARNIGGDLFVSIFLIGLIVGQFASGLSAQASGSRLLFAMGRDGVLPKRFFGSLHGR FGTPVNSILLCAVVALLALKLDVTTSTSFINFGAFLAFSLVNLSVIFHYWVGGRQRGLRELILFLIFPLIGLAADLWLMS SLDHLAIYLGASWLVIGLVYLGFLTRGFSRQPPEMDFQEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01507.1 | putative amino acid/amine transport protein | Not tested | PAGI-1 | Protein | 6e-95 | 51 |
