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Name : cvrA (PFL_0488) Accession : YP_257632.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : potassium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 558641 - 560383 bp Length : 1743 bp Strand : - Note : identified by similarity to SP:P76007; match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF03471 DNA sequence : TTGAATGCGACGACCATCAACAGCCTGTTCTTGATCGGCGCGTTGCTGGTAGGTGCGAGCATTCTGGTGAGTTCACTTTC ATCGCGCCTGGGCATCCCGATCCTGGTGATCATCCTGGCCGTGGGCATGACCGCCGGGGTGGACGGCGGCGGCATCATCT TCGACAACTACCCGACCGCCTACCTGGTGGGCAACCTGGCCCTGGCCGTGATCCTGCTGGACGGCGGCCTGCGTACCCGG GTCGCCAGCTTCCGCGTGGCCCTGTGGCCGGCGCTGTCCCTGGCCACGGTGGGGGTGCTGATCACCACTGGCCTGACCGG CATGGCAGCCGCCTGGCTGTTCGACCTCAACCTGATCCAGGGCCTGCTGATCGGCGCCATCGTCGGCTCCACCGACGCCG CCGCGGTGTTCTCGCTGCTGGGGGGCAAGGGCCTCAACGAGCGGGTCACCGCCAGCCTGGAGATCGAATCCGGCAGCAAC GACCCGATGGCGGTGTTCCTCACCGTGACCCTGATCGACATGCTCGCCAGCGGCCACACCGGCCTGCACTGGAGCCTGCT GACGGACCTGATCCGCGAGTTCGGCATCGGCGCGGTGATCGGCCTGGGCGGTGGCTGGCTGATGTTGCAACTGGTCAACC GCATCCACCTGGCCACCGGCCTGTACCCGATCCTGGTGGTGGCCGGCGGCCTGGTGGTGTTCGCCCTGACCAACGCCCTG CACGGCAGCGGCTTCCTCGCCGTGTACCTGTGCGGCCTGGTAATCGGCAACCGCCCGGTACGCAGCCGCCACGGCATCCT GCACATGCTCGACGGCATGGCCTGGCTGGCACAGATCGGCATGTTCCTGGTGCTGGGGCTGCTGGTCACCCCCCACGACC TGCTGCCCATCGCCCTGCCGGCCCTGGGCCTGGCGCTGTGGATGATCCTGTTCGCCCGACCGCTGTCGGTGCTGGTGGGC CTGGCGCCGTTCAAGGCCTTCCATGGCCGGGAAAAGGCCTTCATTTCCTGGGTCGGGCTGCGCGGTGCGGTACCGATCAT TCTCGCGGTGTTCCCGCTGATGGCCGGGCTGCCCAATGCCCAGCTGTACTTCAACCTGGCGTTCTTCATCGTCCTGATCT CGCTGCTGGTGCAGGGCACCAGCCTGCCGTGGGTGGCCAAGTGGCTGAAGGTGACGGTTCCACCGGAGCCGGCACCGATC TCCCGGGCGGCCCTGGAGGTCCACGTCACCAGCGAGTGGGAGCTGTTCGTCTACCGCCTGGGGGCGGAGAAATGGTGCAT CGGCGCCGCCCTGCGGGAGCTGAAAATGCCCGAGGGCACGCGCATCGCCGCACTGTTTCGTGGCCAGCAACTGCTCCATC CGTCGGGTAGTACGGTGCTCGAAGCCGACGATCTGCTGTGCGTGATCGGCCATGAACACAACCTCCCGGCCCTGGGCAAA CTCTTCAGCCAGGCTCCGGAACGCGGCCTGGACCTGCGCTTCTTCGGTGACTTCGTGCTCGAGGGCGATGCCCAGCTGGG CGCGGTCTCGGCGCTCTACGGGCTCAAGCTCGACGGCCAGGACGCAGACATGCCGCTGGGCGCCTTCATCGCCCAGAAGG TCGGTGGTGCACCGGTGGTCGGCGACCAGGTGGAATGGAACAACACCATCTGGACCGTGGCCGTGATGGACGGGAACAAG ATCGGCAAGGTCGGCGTCAGATTCCCCGAAGGAAGTCGCCCCGGCCCCGGACTCTTCCTCTAA Protein sequence : MNATTINSLFLIGALLVGASILVSSLSSRLGIPILVIILAVGMTAGVDGGGIIFDNYPTAYLVGNLALAVILLDGGLRTR VASFRVALWPALSLATVGVLITTGLTGMAAAWLFDLNLIQGLLIGAIVGSTDAAAVFSLLGGKGLNERVTASLEIESGSN DPMAVFLTVTLIDMLASGHTGLHWSLLTDLIREFGIGAVIGLGGGWLMLQLVNRIHLATGLYPILVVAGGLVVFALTNAL HGSGFLAVYLCGLVIGNRPVRSRHGILHMLDGMAWLAQIGMFLVLGLLVTPHDLLPIALPALGLALWMILFARPLSVLVG LAPFKAFHGREKAFISWVGLRGAVPIILAVFPLMAGLPNAQLYFNLAFFIVLISLLVQGTSLPWVAKWLKVTVPPEPAPI SRAALEVHVTSEWELFVYRLGAEKWCIGAALRELKMPEGTRIAALFRGQQLLHPSGSTVLEADDLLCVIGHEHNLPALGK LFSQAPERGLDLRFFGDFVLEGDAQLGAVSALYGLKLDGQDADMPLGAFIAQKVGGAPVVGDQVEWNNTIWTVAVMDGNK IGKVGVRFPEGSRPGPGLFL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 2e-144 | 66 |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 2e-144 | 66 |
