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Name : pyk_2 (PFL_4797) Accession : YP_261878.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : pyruvate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0469 EC number : 2.7.1.40 Position : 5537332 - 5538783 bp Length : 1452 bp Strand : + Note : identified by similarity to SP:P21599; match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064 DNA sequence : ATGTCCGTTCGTCGTACCAAAATCGTTGCCACCCTTGGCCCGGCCAGTAACTCGCCGGAAGTTCTCGAACAGCTGATTCT CGCGGGCCTGGATGTTGCCCGTCTGAACTTCTCCCACGGCACTCCGGACGAGCACAAGGCTCGCGCCAAACTGGTCCGCG ACCTGGCAGCCAAGCACGGCCGCTTCGTGGCCATCCTCGGCGACCTGCAGGGCCCGAAGATCCGCATCGCCAAATTCGCC AACAAGCGCATCGAGCTGAAGATCGGTGACAAGTTCACCTTCTCCACCAGCCATCCGCTGACCGAAGGCACCCAGGATAT CGTCGGCATCGACTACCCGGATCTGGTCAAGGACTGCGGCGTGGGCGACGAGCTGCTGCTGGACGACGGCCGCGTGGTGA TGCGTGTGGAAACCGCCACCGCCACCGAGCTGCATTGCGTGGTGACCATCGGCGGCCCGCTGTCCGACCACAAGGGCATC AACCGTCGTGGTGGTGGCCTGACCGCTCCGGCCCTGACCGAGAAAGACAAGGCCGACATCAAGCTCGCGGCCGAGATGGA AGTCGATTACCTGGCCGTGTCCTTCCCACGGGACGCCGCCGACATGGAATACGCGCGCAAGCTGCGTGACGAAGCCGGTG GTACTGCCTGGCTGGTAGCGAAGATCGAACGCGCGGAAGCGGTGGCCGACGACGAAACCCTCGACGGCCTGATCAAGGCC AGCGACGCGGTCATGGTTGCCCGTGGCGACCTGGGCGTGGAAATCGGCGACGCCGAGCTGGTGGGCATCCAGAAGAAAAT CATTCTGCACGCCCGTCGCCACAACAAGGCGGTGATCGTTGCGACCCAGATGATGGAGTCGATGATCCAGAACCCGATGC CGACCCGCGCCGAAGTGTCCGACGTGGCCAACGCCGTGCTCGACTACACCGATGCGGTGATGCTCTCGGCGGAAAGCGCA GCCGGTGCCTACCCGCTGGAAGCGGTGCAGGCCATGGCGCGGATCTGCGTCGGTGCGGAAAAGCACCCCACCAGCAAGAC CTCCAGCCACCGCATGGGCAAGGTGTTCGAAAGCTGCGACCAGAGCATCGCCCTGGCTGCCATGTACACCGCCAACCACT TCCCGGGCGTGAAGGCGATCATCGCCCTGACCGAAAGTGGCTACACCCCGCTGATCATGTCGCGCATTCGCTCCTCGGTG CCGATCTACGCCTACTCCCCGCACCGCGAAACCCAGGCTCGCGCAGCCATGTTCCGTGGCGTCTACACCATCCCGTTCGA TCCGGCTTCCCTGCCGCCCGAGCAGGTCAGCCAGGCAGCGATCGATGAGCTGCTCAAGCGCGGTGTCGTAGAGAAAGGCG ACTGGGTGATTCTCACCAAGGGCGACAGCTACCACACCACCGGCGGCACCAACGGCATGAAGATCCTGCACGTGGGCGAC CCGATGGTCTGA Protein sequence : MSVRRTKIVATLGPASNSPEVLEQLILAGLDVARLNFSHGTPDEHKARAKLVRDLAAKHGRFVAILGDLQGPKIRIAKFA NKRIELKIGDKFTFSTSHPLTEGTQDIVGIDYPDLVKDCGVGDELLLDDGRVVMRVETATATELHCVVTIGGPLSDHKGI NRRGGGLTAPALTEKDKADIKLAAEMEVDYLAVSFPRDAADMEYARKLRDEAGGTAWLVAKIERAEAVADDETLDGLIKA SDAVMVARGDLGVEIGDAELVGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESA AGAYPLEAVQAMARICVGAEKHPTSKTSSHRMGKVFESCDQSIALAAMYTANHFPGVKAIIALTESGYTPLIMSRIRSSV PIYAYSPHRETQARAAMFRGVYTIPFDPASLPPEQVSQAAIDELLKRGVVEKGDWVILTKGDSYHTTGGTNGMKILHVGD PMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pykA | NP_273151.1 | pyruvate kinase | Not tested | IHT-A | Protein | 2e-77 | 46 |
| pykF | YP_216386.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 3e-60 | 45 |
| pykF | NP_805051.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 3e-60 | 45 |
| pykF | CAA68205.1 | pyruvate kinase like protein | Not tested | SPI-2 | Protein | 2e-59 | 45 |
| STY1744 | NP_456147.1 | pyruvate kinase | Not tested | SPI-2 | Protein | 4e-60 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pyk_2 | YP_261878.1 | pyruvate kinase | VFG0479 | Protein | 1e-60 | 45 |
