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Name : cyoB_1 (PFL_4734) Accession : YP_261816.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : cytochrome o ubiquinol oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.10.3.- Position : 5470370 - 5472343 bp Length : 1974 bp Strand : - Note : identified by similarity to SP:P18401; match to protein family HMM PF00115; match to protein family HMM TIGR02843 DNA sequence : ATGTTCGGTAAATTGACCTGGGATGCGGTGCCCACCGGCGAACCCATCATCATGTACACCCTGCTGGTGGTCGGCCTCAT CGGCCTCGGGGTGCTTGGCGCGGTCACCTACCAGCGCAAGTGGGGCTACCTGTGGCGCGAATGGCTGACCACGGTGGACC ACAAGAAGATCGGCGTCATGTATATCCTGGTGGCGCTTGTGATGCTGCTGCGCGGTTTTTCCGACGCCATCATGATGCGA ACCCAGCAGGCGATGGCGGCCTCGGGCGGACCGGGCTACTTGCCGCCGGAACACTATGACCAGATTTTCACCGCCCATGG CGTGATCATGATCTTCTTCATGGCCATGCCGTTCGTGGCCGGTCTGATGAACCTCGTGGTGCCGCTGCAGATCGGTGCTC GCGATGTGGCCTATCCCTTTCTCAATGCCCTGAGCTTCTGGCTGTTCGTCGCCGGCGCGGCACTGGTCAATATTTCCCTA GGCGTGGGAGAGTTCGCCCGGACCGGGTGGGTGGCTTATCCGCCGTTGTCGGAGCTGGGCTACAGCCCCGGGGTCGGGGT GGACTACTACATATGGGCCTTGCAGATCTCCGGGATCGGCACCTTGCTCACCGGGGTGAATTTCTTCGTCACCATCCTGA AGATGCGCACCACCGGCATGACCCTGTTCAAGATGCCAGTATTCACCTGGAACTCGCTGTGCACCGCGGTGCTGATCCTG GCGGCGTTCCCGATCCTCACCGCGACCTTGCTGATGTTGTCCCTGGACCGCTACCTGGGCATGCACTTCTTCACCAACGA GGCCGGCGGCAACCCGATGATGTACGTCAACCTGATCTGGGCATGGGGCCACCCGGAGGTGTACATCCTGATCCTGCCGG CGTTCGGCGTCTTCTCGGAGATCGCCGCGACCTTCAGCAGCAAGCGCCTGTTCGGCTACGTGTCGCTGGTCTGGGCCACC ATCGCCATCACCATCTTGTCGTTCATCGTCTGGCTGCATCATTTCTTCACCATGGGCGCCGGCGGCAACGTCAACGCCTT CTTCGGCATCATGACGATGATTATCGCCGTGCCCACCGGGGTGAAGATCTTCACCTGGCTGTTCACCATGTACCGCGGCC GCGTACGTTTCGCCACGCCGATGCTGTGGACCATGGGCTTCATCGTCACCTTCAGCATCGGCGGCATGACCGGGGTCCTG CTGGCGGTGCCGGGGGCCGACTTCATGCTGCACAACAGCCTGTTCCTGATCGCCCACTTCCATAACGTGATCATTGGCGG TGCAGTGTTCGGCTATATGGCGGGGTTGACCTACTGGTTTCCCAAGGCCTTCGGCTTCACCCTCAATGACCGCCTGGGAC GCCTGTCGTTCTGGTGCTGGCTAGTGGGCTTCTACTTCGCCTTCATGCCGTCCTACGTGCTGGGGTTCATGGGAATGACT CGGCGCCTCAACCACTTCGACAACCCCGAGTGGCGTCCCTGGCTAATGCTCGAGCTGATCGGCGTGGGCATCATCCTCTG TGGCGTCACCTGCCAGCTCTTGCAACTGTGGGTCAGCGTGCGCGACCGTCGGGCCAACCGCGACCGCAGCGGCGACCCCT GGGATGGCCGAACCCTGGAATGGGCGACCACCTCGCCACCGCCACTGTACAACTTCGCCGAGCAACCAGTGGTCGACGAC CTCGACGCCTACTGGGGTATGAAGGAGCGCGGCACCAGCACCCTCAACCGTACCGACTACCGGGCCATACACATGCCGCG CAACACCTCGGCCGGGCTGGTCATGAGTGCCTTCGCCCTGGTCTGCAGTTTCGCACTGGTCTGGCACATCTGGTGGCTGG CGCTGGCCAGCCTGGCGGCCACGATGGTCGCCCTGGTGGTGCGCAGCAATGATGAGGATACCGACTACTTCATTCCCGCC GACGAAGTGGCGCGGATCGAGAAGGCCCGGCTCGCACACTTGGCGGAGGCTTGA Protein sequence : MFGKLTWDAVPTGEPIIMYTLLVVGLIGLGVLGAVTYQRKWGYLWREWLTTVDHKKIGVMYILVALVMLLRGFSDAIMMR TQQAMAASGGPGYLPPEHYDQIFTAHGVIMIFFMAMPFVAGLMNLVVPLQIGARDVAYPFLNALSFWLFVAGAALVNISL GVGEFARTGWVAYPPLSELGYSPGVGVDYYIWALQISGIGTLLTGVNFFVTILKMRTTGMTLFKMPVFTWNSLCTAVLIL AAFPILTATLLMLSLDRYLGMHFFTNEAGGNPMMYVNLIWAWGHPEVYILILPAFGVFSEIAATFSSKRLFGYVSLVWAT IAITILSFIVWLHHFFTMGAGGNVNAFFGIMTMIIAVPTGVKIFTWLFTMYRGRVRFATPMLWTMGFIVTFSIGGMTGVL LAVPGADFMLHNSLFLIAHFHNVIIGGAVFGYMAGLTYWFPKAFGFTLNDRLGRLSFWCWLVGFYFAFMPSYVLGFMGMT RRLNHFDNPEWRPWLMLELIGVGIILCGVTCQLLQLWVSVRDRRANRDRSGDPWDGRTLEWATTSPPPLYNFAEQPVVDD LDAYWGMKERGTSTLNRTDYRAIHMPRNTSAGLVMSAFALVCSFALVWHIWWLALASLAATMVALVVRSNDEDTDYFIPA DEVARIEKARLAHLAEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 7e-79 | 43 |
