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Name : PFL_4711 (PFL_4711) Accession : YP_261794.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 5443072 - 5444424 bp Length : 1353 bp Strand : + Note : identified by match to protein family HMM TIGR03755 DNA sequence : ATGAAGAAGATGATCCAGGCTATCGGATTAGCCATCAGCTTGAGCGGTACCGCTTTAGCGGCTGACCCAATCAAGGTTGA GTCTCAGGGCAGTGTGATTGGTGACGACGTGCTTTACAGCATCGGCGGGGGGAGTGCTGTAAGCATGGGCAGCGCCGGGC AAATGGAAAGCATTACCGTTGGAGCGGGATGGCAGAACAACCTGATCTGCGGAAACATGGATTTGAGCCATACCCTGGAG AACCAGCTGAACGGGGCCACACAGGGCTTTCAAAACATCATGAGCAACGTCATCCAGAGCGCTACAGGCGCGGTGATGTC GCTGCCGGCATTGATTCTGCAAAGAGCAAACCCTGCACTGTATAACCTGCTGACTAACGGCATCCTGCAGGCGCGCCTCG ACTACGATCGATCGAAGGGCACCTGCAGGGCAATGGCCGAACGCATGGCCGACATCGCCGGTAGCCAGGCCGGCTGGGGG AAGGTCGCAGAAGGACAAAAAATGGGACAGGCATTGTCCACAGGAAATGACGCTGTTGCAGTAGTCGATAAAGTTGAGAA CGGCCCAGGTAACTCCGGGGTTACATGGGTTGGGGGTGAGCAAGCAGGTGGCTCAGGACAAAAACCCATCAAGGTTGTAA GCGACGTCGTCAAAGCTGGCTACAACCTGCTAAACGGCCGATCCGCTACTGAGACCTCCCGCGTTCAACAATCGAACTGC TCGAACGGCCTGGTTTGCGGTTACTGGGAGTCTCCTACCGAAGCCGCGCAGTTTGCGAACCGGGTCCTGGGTGAGCAAGA AATCAAAACCTGCGAAGGCTGCTCCAGTGCCTCGACACCCGGCGTGGGGCTCACGCCACTGATCCAAGAAACCTACGATA AAAAACTGACAGCCATCCAGGATCTGCTGAAACCTGGTACGCATATCACCTCAGAAAAACTGAGAGAGGCCAGTAGCGAC TCTCTGCCAATTACCCGCGGTGTGATCAATGCACTGCGGGATGAGCGCGATCAAGCAGTGCTGGCACAGCGTTTGGCATC CGAAGTGGCGCTCTCGGACATTCTGGGCAAAGCGTTGATGTTGAATCGCATGTTGATAACAGGATCTAGAGAATCGAACG TCGCCGCGAACAATCTGGCCGTGCAACAGACAACCACCCAATCAGACGTTCTGCAGAAGGAAATCGACAATCTCAAGATG GAGCTAGATCTTCGGCGCGACTTGGCGAACAACTCACCGATGGCGATCATTGAGCGCGGTAAGACTCGCGCTGAGAACTC CCGGACGATCTACCAAGCTGCTCCCGAAAGTGATCGCCTGCAACTGCTGCAGAAACCTACAGGCAGGGAGTAA Protein sequence : MKKMIQAIGLAISLSGTALAADPIKVESQGSVIGDDVLYSIGGGSAVSMGSAGQMESITVGAGWQNNLICGNMDLSHTLE NQLNGATQGFQNIMSNVIQSATGAVMSLPALILQRANPALYNLLTNGILQARLDYDRSKGTCRAMAERMADIAGSQAGWG KVAEGQKMGQALSTGNDAVAVVDKVENGPGNSGVTWVGGEQAGGSGQKPIKVVSDVVKAGYNLLNGRSATETSRVQQSNC SNGLVCGYWESPTEAAQFANRVLGEQEIKTCEGCSSASTPGVGLTPLIQETYDKKLTAIQDLLKPGTHITSEKLREASSD SLPITRGVINALRDERDQAVLAQRLASEVALSDILGKALMLNRMLITGSRESNVAANNLAVQQTTTQSDVLQKEIDNLKM ELDLRRDLANNSPMAIIERGKTRAENSRTIYQAAPESDRLQLLQKPTGRE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 4e-137 | 66 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-139 | 64 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 1e-138 | 63 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 4e-134 | 61 |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-114 | 60 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-121 | 60 |
