|
Name : PFL_4710 (PFL_4710) Accession : YP_261793.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : - COG ID : - EC number : - Position : 5442113 - 5443051 bp Length : 939 bp Strand : + Note : identified by similarity to GB:AAP94687.1; match to protein family HMM PF07513; match to protein family HMM TIGR03756 DNA sequence : ATGAGATCTCGCACCTTGGCATTCGCGCTGACTGCGCTCACTTCATTTTCAGCATCGGCCGCAATCAACACGGCAGCAAT CGTGGGGTCTACAGCCTCCCCGACCTGCCTTGATTACCGGGTTGTTGGGATCTGTTACTGGCTCCTTTGCACGCCATTCG GATGCAAGATCAAAACTTCAACGAAGGTACGCCACTACGTGCCCGACGCCGTTGTCTCGGCATACGCCAATACTGGCGAA AACCCATGGGTGGAAGTCAGCCCGATGGGGAGGCCGAATTCCACCGCGCAAGCTGGGAACAACGGAACAACGAATCACAA CGCCGAAAACAACATCTCGAAGTTCAAAAACGCTGACGTAATCGGGCACCCAGGTGGGGCTGTTTTCAGCAAGTTTGCAG CCGCTTCTGGCTACGCATGCCCAGGCGCCACCCTCCCCTTCGTTCCGTACATGCTCAGTACCCTCGATACCCTTGCATGG CGCCACGGAATCCCCGAAGTCGTCTATCCAGAGTCCCTGATGCCTGGTCTGAGGGAAGTTGGCGGCCTTCTATCAACGAA TATGTGGGGAAGCATCTATCCGCGCAGCGGATTCATTCACCAGAGCGACGACTTCAAGGCAGCAGCGGTGATCGCTCAAC GTGCCGGCGATATCACAACCCGTTTGGGCCAACCGCACGTCTACGTGCCAATGCGGACCTTCCCAATGCCTGGCTACTGG CCTGCCGGCGAACTCCTCGAGGACGACTACTCGACCGGAAAGTGGCAGCAGCTCACACCTTCCCTGAGCCCAACTTGCGC AACATTTCCTACCAGCGGGTGGGGAATAGGCACCGATATGGAAGCGGCCAACGGAGCCTATGCCTGGGCCCTCTGGCGCC CCTACTCGTGCTGCCAACGGCGCGGGCAGATTTTCCTCGGCAGCACTGACTTTCAATAA Protein sequence : MRSRTLAFALTALTSFSASAAINTAAIVGSTASPTCLDYRVVGICYWLLCTPFGCKIKTSTKVRHYVPDAVVSAYANTGE NPWVEVSPMGRPNSTAQAGNNGTTNHNAENNISKFKNADVIGHPGGAVFSKFAAASGYACPGATLPFVPYMLSTLDTLAW RHGIPEVVYPESLMPGLREVGGLLSTNMWGSIYPRSGFIHQSDDFKAAAVIAQRAGDITTRLGQPHVYVPMRTFPMPGYW PAGELLEDDYSTGKWQQLTPSLSPTCATFPTSGWGIGTDMEAANGAYAWALWRPYSCCQRRGQIFLGSTDFQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13357.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-97 | 74 |
| EXA20 | ABD94629.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-97 | 74 |
| RL017 | AAP84144.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 2e-95 | 73 |
| pph89 | CAI36130.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 4e-96 | 71 |
| ORF C43 | AAN62136.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-88 | 66 |
| ORF SG51 | AAN62273.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-87 | 65 |
| STY4576 | NP_458661.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-70 | 49 |
| t4273 | NP_807871.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-70 | 49 |
| YpsIP31758_3701 | YP_001402655.1 | hypothetical protein | Not tested | YAPI | Protein | 6e-67 | 49 |
| api54 | CAF28528.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 2e-66 | 49 |
| Pmu_02990 | YP_005176198.1 | integrating conjugative element protein, PFL family | Not tested | ICEPmu1 | Protein | 3e-61 | 47 |
| YE3467 | YP_001007628.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-60 | 47 |
| unnamed | AAX39458.1 | unknown | Not tested | Hrp PAI | Protein | 2e-53 | 46 |
| PMI2573 | YP_002152292.1 | hypothetical protein | Not tested | Not named | Protein | 2e-58 | 46 |
