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Name : PFL_4705 (PFL_4705) Accession : YP_261788.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : integrating conjugative element protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0711 EC number : - Position : 5433332 - 5434828 bp Length : 1497 bp Strand : + Note : identified by match to protein family HMM TIGR03752 DNA sequence : GTGAACATTCAAAGTAATCCCCTACTGAAGTGGCTTGCAGTGCCCTTTCTTGTCTTCGCTGTGGTGATGTTCTTTACCGC AACAAAAAAGGGACAGGTGGATCACCAAGATAACAACGTCGTGGCCATCGGTTCCGATGAGGCCCAAAAACTAGGTGTGG ATGGCGATACACCAGGTGACACCCTTCGGACCGTAGTCACAGAAAGCAAGGAGCTCAGGAAACAGGTGGCTGAGATGCTA AAGATCAACAACGATCAGAAGTCTCAGAACGAAGAGCTTCAGAAGCAGCTGAAGGACATGGACTCAAAAGTTGAGAACCG TTTAGACAATGCAAAAAAAGAACTACAGGACGAGGTTCAGAACAAGAGCCAAGGCCTGATCGACTCTCTGCAAACTCAAC TCAACAACCTCAGCAACCAACCTAACGCAACCGGGGGCGACCTTCCAATCGGGTTTGGTGTGCAGCCAGGTGACGGCAAA GGCTTCGAACAGTCTCCTACAACAAAGGACGGCCTTGTCTGGATTGAACCACGCGATGCCACTGCCGTTGACGCCAACGG TAAACCGTTGCCCCTTGGCTCTAGTCAGGCTGCAAGCGGGTTCAACTTTCCTACCAGCTTCGGCCCGGCAGCCAACAGAG GTCAGAATGCACTGGAACAGATCGATCAAGGCCTGCGTCCAGGAAATCAACAGGTCGACCGTGAAACCAGGAAGTTTGTG CGCAAGACCTACACTTTGCCCCAGAACTCCACATTGATGGGATCAGTGGCCATGTCGGCCCTGATCGGCCGGGTGCCAAT TGATGGGACCGTCAACGACCCGTTTCCTTTCAAGATCCTGATTGGCCCAGACAACCTGACTGCGAACGGCATCGAGCTCC CCAACGTCGCTGGTGCAGTCGCAACAGGCACCGCCAGTGGCGACTGGACACTCTCATGTGTAAGAGGGCAGGTCCGCAGC CTGACGTTTGTCTTCAACGACGGCACTGTCAGGACCTTCCCGGCGCCGGCTGAAGACGCGGACGGCAACCAGAACAACAA CCAGGCCAGCAGTACAGATGGGAAGACCATTCAGGGTGGCCTTGGCTGGATCAGCGACTCCTACGGCGTTCCATGTATCT CGGGTGATCGGCGCTCCAATGCGGCCGAATACTTGACTAATCAGTCGCTTGTTACTGCCGCCGGTGCCGGCGTTGCGAAG CTGCTTAAAGCCGACGAGAGCAACAACACAACGATGTTTACCGGGAATGGCACCTCTTTCGGCACCACCGGTTCATCAGG AAATTCCGCGATCGGGTCGATCTTGTCCGGAGGCGTAAGTGATATCCGCTCCTGGATGAACAAGCTCTATGGCGAAGCAT TTGCTGCTGTGTATGTACAGCCTGGCGCGAAGGTCGCCGTACACCTCGATCAGCAACTGGCGATCGACTATGAACTGAAA GGTCGCAAAGTCGACTACCACTCCGGAGCGAATAATGTCCCAGCCGCGCTCGATTAA Protein sequence : MNIQSNPLLKWLAVPFLVFAVVMFFTATKKGQVDHQDNNVVAIGSDEAQKLGVDGDTPGDTLRTVVTESKELRKQVAEML KINNDQKSQNEELQKQLKDMDSKVENRLDNAKKELQDEVQNKSQGLIDSLQTQLNNLSNQPNATGGDLPIGFGVQPGDGK GFEQSPTTKDGLVWIEPRDATAVDANGKPLPLGSSQAASGFNFPTSFGPAANRGQNALEQIDQGLRPGNQQVDRETRKFV RKTYTLPQNSTLMGSVAMSALIGRVPIDGTVNDPFPFKILIGPDNLTANGIELPNVAGAVATGTASGDWTLSCVRGQVRS LTFVFNDGTVRTFPAPAEDADGNQNNNQASSTDGKTIQGGLGWISDSYGVPCISGDRRSNAAEYLTNQSLVTAAGAGVAK LLKADESNNTTMFTGNGTSFGTTGSSGNSAIGSILSGGVSDIRSWMNKLYGEAFAAVYVQPGAKVAVHLDQQLAIDYELK GRKVDYHSGANNVPAALD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL024 | AAP84151.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 6e-141 | 69 |
| unnamed | ABR13364.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-145 | 67 |
| EXA35 | ABD94644.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 2e-144 | 67 |
| pph82 | CAI36123.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 1e-119 | 55 |
| ORF C49 | AAN62143.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-93 | 47 |
| ORF SG59 | AAN62281.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-86 | 45 |
