Gene Information

Name : PFL_4697 (PFL_4697)
Accession : YP_261780.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : integrating conjugative element membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5427701 - 5428450 bp
Length : 750 bp
Strand : +
Note : identified by match to protein family HMM TIGR03747

DNA sequence :
ATGGCAGATGACGTATCAAAGAAGGCTCAACAGCAACAGGAGCGACCAGAGTCGCTGATCAGCAAGATTTTCTGGTTCCC
CTTCAACTTCCTCGGGGTGATGTTCGGTTCTCTCATAGTCGCGATCCTGGTCGACTGGGTATGCCTCTACTTTTTCTGGC
CAGAAGCTGGCTGGAGGCACGGGCAGCAAATGCTAACAAATGAGCTCAGTTGGCTATCCCAGGGGCTGGTACACAGTGCC
GTTGTGCAAGAACCCGGGCGCACAGCAACCTGGCTCGTTACAGGGGCCTATGACTGGCTGATCGTGAAGACTGGGATGCT
CAGCTGGGTCCAGGGGATGGAGTCGATAGCACATGCCGGCCCACGCAACGACCTGGACATTCGATACATGGCAGCACAAA
GCGTCACAACGGTGCAGAACTATGCTCTTGCAGCGCTGTTCACCGTCCTGGTGTTCTGTGTTCGTCTCGTTGTGTTGTTG
ATGACCATACCGCTGTTCGCTATGGCCGCACTCACAGGCCTGGTTGATGGCCTGGTCCGACGAGATCTCCGCAAATTCGG
TGCTGGCCGCGAGTCCAGCTACCTCTACCACAAGGCAAGGGGAACGCTCATTCCACTGGCCATTCTCCCATGGACCTTCT
ACCTGGCGCTTCCGATCAGCATCAGCCCGCTCCTGGTCCTACTCCCGTGTGCGGCGCTGCTCGGCGTCGCAGTGAGTATC
ACTGCTGCCAGCTTCAAGAAATATCTTTGA

Protein sequence :
MADDVSKKAQQQQERPESLISKIFWFPFNFLGVMFGSLIVAILVDWVCLYFFWPEAGWRHGQQMLTNELSWLSQGLVHSA
VVQEPGRTATWLVTGAYDWLIVKTGMLSWVQGMESIAHAGPRNDLDIRYMAAQSVTTVQNYALAALFTVLVFCVRLVVLL
MTIPLFAMAALTGLVDGLVRRDLRKFGAGRESSYLYHKARGTLIPLAILPWTFYLALPISISPLLVLLPCAALLGVAVSI
TAASFKKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RL035 AAP84162.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-61 76
EXA46 ABD94655.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-71 73
RL046 AAP84172.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-71 73
unnamed ABR13374.1 hypothetical protein Not tested PAGI-5 Protein 1e-70 73
pph73 CAI36114.1 hypothetical protein Not tested PPHGI-1 Protein 7e-61 65
ORF SG67 AAN62289.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-39 53
ORF C64 AAN62158.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-38 50