Gene Information

Name : PFL_4695 (PFL_4695)
Accession : YP_261778.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5424720 - 5425226 bp
Length : 507 bp
Strand : +
Note : identified by similarity to GB:AAP22559.1; match to protein family HMM TIGR03765

DNA sequence :
ATGACGAGTTTTCTGAGGGCTGCTCCAGTCCTGCTTGCAATGCTTGCAGCCGGCACGGTGCAAGCCAGTTCCAAACTCAT
AGTTGTCCAGGACCACGGTGGGGTTTCAGCCCTGCCCTACTACCAGGACCTCAACCTGGTACCAGAGTCGGGTCCCCCAC
CACTCAAAGGACTCCTAAGCGGTGGGGCCTATCCCGTCAAAACTCCAGAGATGACGCCAGGGGCGGTAGTAGGCAGGACA
ATCAATGCCCCTGGCCTGCAACCTCTTTTTCTCATCGGTGACGACCCGATGTCACGAGCATGGCTGACACAGCACCTGCA
GCAGCTGCAGCAACTGCAAGCAGTAGGGCTAGTAGTCAACGTCACCTCAGCCGCTCGGCTCGACGAGATCAGGCGTTTGG
CGCCCGGATTACAACTTGAACCGACATCTGCAAGCGATATCGCCAACCGGCTAGGGCTGAAGAACTACCCGGTACTGATC
ACCTCAACAACCATTCGACAGCAGTAA

Protein sequence :
MTSFLRAAPVLLAMLAAGTVQASSKLIVVQDHGGVSALPYYQDLNLVPESGPPPLKGLLSGGAYPVKTPEMTPGAVVGRT
INAPGLQPLFLIGDDPMSRAWLTQHLQQLQQLQAVGLVVNVTSAARLDEIRRLAPGLQLEPTSASDIANRLGLKNYPVLI
TSTTIRQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13377.1 hypothetical protein Not tested PAGI-5 Protein 2e-28 55
EXA49 ABD94658.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-29 55
RL049 AAP84176.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-27 54
pph71 CAI36112.1 hypothetical protein Not tested PPHGI-1 Protein 1e-25 51
ORF SG69 AAN62291.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-26 51
ORF C66 AAN62160.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-24 46
PMI2590 YP_002152309.1 hypothetical protein Not tested Not named Protein 4e-21 44