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Name : rulB (PFL_4692) Accession : YP_261775.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : ultraviolet light resistance protein RulB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 5421354 - 5422625 bp Length : 1272 bp Strand : + Note : identified by similarity to SP:P04152; similarity to GB:AAR02142.1; match to protein family HMM PF00817 DNA sequence : ATGTCTGACTCGGTATTTGCACTTATCGATTGCAACAGCTTCTACGCAAGCTGTGAGCGGGTATTCAGGCCGGACCTGGC TCGGGTGCCGATCGTGGTCCTGAGCAATAACGACGGCTGCGTTATTGCACGCAGTTATGATGCTAAACCGCATGTAAAGA TGGGCGAGCCGTACTTTCAAATTAAGCGCAAGCTCCAGCAGTTGGGCATAGTCGCATTTTCGTCGAATTACGCGCTCTAT GGCGATATGAGCCAGCGCGTCATGAGCGTCATCGAGTCCATGGTTCCGGCTGTGGAGGTATATTCGATCGATGAAGCTTT CGCCGATCTGAGTGGGATCTGCGGGCCGGAAGCCCTGGGCCGGCAAATCCGCGCGCAGGTTATGCGCGATACCGGGATAC CCGTCGGAGTTGGGATCGCCAGGACTAAAACCCTGGCTAAGCTGGCAAACCACACCGCCAAACGCCTGCAGACACACACC GGAGGCGTCGTCGATCTATGCGACACGTTCAAGCGAGACTGGGTGCTTCGTAACACCGACGTCGCAGAAGTCTGGGGTGT TGGCCGCCGGATGACAGCGCACCTGGAATCAATTGGGATCAGGACAGCTATGGATCTGGCCAATGCGGATCCTCGAACAC TGCGCATGAAATTCAGCGTAGTCATTGAGAAAACTGCACGGGAACTAGCCGGTACCGCGTGCCTGGAGCTGGACGACCCC GCTCCACCGAAGCAGGAAATCTGCTGCAGTCGGATGTTCGGCCAACGCCTGCAGGAACTGCCAGCGCTCAAAGAGGCGGT GGCCACCTACATGATGCGTGCCTCAGAAAAGCTCCGAGCCCAGGGCTCACTGTGCAAGAAAATTCGTGTCAGCATCCGCA CTGGCATGTTCAATCCGGAGGAGGCGAAGTATGCAAACGGTGTTGTGGTGCATCTGCCCTACCCCACCGACGACGTGCGT TTACTGACACGGGAAGCGGTGGATGCCTTGGACCGAATATTCAGGCCAGGCTTCAAGTACAGCAAAGCAGAAGTTATGTT GCTCGACCTATGCCAGCCAGGCGACTACACGGACGACCTTTTTGCGGTGTCGCAACCTGCTGACGCAACTCGGGTAATGA AGGTTCTTGATCAGATTAACGATCGATGGGGTCGAGGAACTCTTCGATCAGCCAGCGTGCCAGCAGAACCCGCCTGGGGC ATGCGCAGAGAGATGATGAGCCGCAGCTACACCACACGTCTAGAGCAACTCTGGACGGTTCACTGTCATTGA Protein sequence : MSDSVFALIDCNSFYASCERVFRPDLARVPIVVLSNNDGCVIARSYDAKPHVKMGEPYFQIKRKLQQLGIVAFSSNYALY GDMSQRVMSVIESMVPAVEVYSIDEAFADLSGICGPEALGRQIRAQVMRDTGIPVGVGIARTKTLAKLANHTAKRLQTHT GGVVDLCDTFKRDWVLRNTDVAEVWGVGRRMTAHLESIGIRTAMDLANADPRTLRMKFSVVIEKTARELAGTACLELDDP APPKQEICCSRMFGQRLQELPALKEAVATYMMRASEKLRAQGSLCKKIRVSIRTGMFNPEEAKYANGVVVHLPYPTDDVR LLTREAVDALDRIFRPGFKYSKAEVMLLDLCQPGDYTDDLFAVSQPADATRVMKVLDQINDRWGRGTLRSASVPAEPAWG MRREMMSRSYTTRLEQLWTVHCH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 4e-159 | 76 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-119 | 68 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 6e-83 | 47 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 6e-83 | 47 |
