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Name : PFL_4690 (PFL_4690) Accession : YP_261773.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 5418420 - 5420669 bp Length : 2250 bp Strand : + Note : identified by similarity to GB:AAP84188.1 DNA sequence : ATGCACATGAACGCTTTAAATCAGCCACTGGCTACTCTCCCCCTGAACATCAACCTCACCGATTTCATCGATGAATTTGG TGATGAACTTCTGGAGTCGTTGAACCGCTCCAACCCTCCTGTTTACACCGGGGTTGCTCACGAACAGCGCCAGGCAGTAA TGGACAACCTCAAGCGCAAGCCGTTTGCGGCCCAGGCTGATGTCGTACAAGCCAGTGCCGCACTGCTACTCGATCGCAAT GAGCAGGCCGCGATCATCAACGCCGAGATGGGTACCGGGAAAACAATGATGGCCATCGCTGTTGCAGCCATTATGCACTC AGCAGGCTATCGTCGAACTCTCGTCATTTCTCCACCTCACCTGGTCTACAAATGGCGCCGTGAGATCCTAGAGACCATCC CAGATGCCCGTGTGTGGGTATTAAATGGTCCCGATACGCTGATCAAGCTGCTCAAGCTGCGTGATCAGTTGGGGCTAACC TATGACGGTCGTCAGGAGTTTTTCATCCTCGGTCGCGTGCGGATGCGCATGGGGTTTCACTGGCGGCTCGCCTGCTCTAA AAGGCGCGCTTCCGGCGGACAGCAACTCGCTGCTTGCCCAGACTGCGGCCGGGTCCTCGAGGACCTGGAGGGCAACCTGA TTACCGTGGACGAGTTCGAACGTGGTGATCGCCGCCGCAACTGCAACGCCTGCAATGCGGCTCTCTGGACACTCATGCGC CCTGGTAAAGCAGATGGCGGCGACCGGCGCTCAACGATTTTGAAATCGATGTGCCGTATACCCACGATCGGCCCAGTCCG GGCAGAGCGGCTACTCAACGACTTCGGCGAAGACTTTCTGGCCTCGATGTTGGTGGACAACGTTTCCGAGTTCATCAACT TAATGGACACCAAGGGCAACTTCATCTTCAGCGATCGCCAGGCCAAGCGCATGGAGCGAGCGATGGCCAACATTGAGTTC GGGTTCGGCGAAGGCGGCTATCAACCAACAGAGTTCATCAAGCGCTACCTACCGGATGGGTTCTTCGACCTACTGGTTGT CGATGAGGGGCATGAGTACAAGAACAGCGGATCGGCCCAGGGCCAAGCTATGGGTGTTCTCGCGGCAAAGGCACGCAAAA CCGTGCTGTTGACCGGGACACTCATGGGCGGCTACGCCGACGACCTGTTCTACCTTCTGTTCCGCATTCTGACCCGCCAA ATGATTGAGGACGGCTATCGGCCTAACGCCCGTGGCAGCATGGCGCCCGCGGCTATGGCGTTCATGCGCGATCACGGGGT CCTGAAAGACATCTATACCGAGCGCGATGGAGATTCGCACAAGACAGCAAAAGGCAAGAAGTTCTCAGTTCGAACAGTGA AAGCCCCGGGCTTCGGCCCGAAAGGCATCCACCGCTTCGTGCTGCCCTTCACCGTGTTCCTCAAGCTGAAAGACATCGGC GGGAACATCCTACCCACCTACAACGAGGAGTTTATCGATGTACCAATGGCACCTGGTCAGGCATCCGCCTACCAGAGCCT GGCCTCCAAGCTGACAGCGGAGCTTAGACAAGCCCTTGCACGGCGAGACACTACCCTTCTGGGCGTTGTCCTCAATGTAC TGCTGGCCTGGCCAGACTGCTGCTTCCGATCGGAGATCGTCAAGCACCCGCGCACTCGCGGTACCCTGGCCTTCGTGCCG GCGATTTTCAACGAAGAGCAGCTGATGCCCAAGGAGCAGGCTTTGTTAAGCCTTTGCATCGAGGAGAAAGCGAAAGGCCG CAAGGTCCTCGCCTACACCGTCTACAGCGGGACACGCGACACAACGTGCAGGCTGAAGAAGGTCCTCGAGCAGGCCGGTC TCAAGGTGGCGGTACTGCGGGCCAGCGTTGACACCTCTCGCCGTGAAGACTGGATCCTCGATCAGGTCGACCGTGGCATC GATGTGCTGATCACCAACCCGGAGCTGGTAAAGACTGGGCTGGACCTGCTTGACTTTCCAACCATCGTGTTTCTGCAAAC GGGGTACAACGTCTACACCCTGCAGCAAGCAGCACGACGGTCCTGGCGTATCGGGCAGAAACATCCAGTGCGCGTGATTT TTTTGGGCTATGCCGGCAGCTCGCAGATTACCTGCCTGCAGCTTATGGCCAAGAAGATCGCAGTAGCTCAAAGCACGTCA GGAGATGTGCCGGAATCAGGATTGGACTCGCTGAACCAAGATGGAGACTCGGTTGAAATGGCACTGGCCAGACAACTCAT TGCTGCATAA Protein sequence : MHMNALNQPLATLPLNINLTDFIDEFGDELLESLNRSNPPVYTGVAHEQRQAVMDNLKRKPFAAQADVVQASAALLLDRN EQAAIINAEMGTGKTMMAIAVAAIMHSAGYRRTLVISPPHLVYKWRREILETIPDARVWVLNGPDTLIKLLKLRDQLGLT YDGRQEFFILGRVRMRMGFHWRLACSKRRASGGQQLAACPDCGRVLEDLEGNLITVDEFERGDRRRNCNACNAALWTLMR PGKADGGDRRSTILKSMCRIPTIGPVRAERLLNDFGEDFLASMLVDNVSEFINLMDTKGNFIFSDRQAKRMERAMANIEF GFGEGGYQPTEFIKRYLPDGFFDLLVVDEGHEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRILTRQ MIEDGYRPNARGSMAPAAMAFMRDHGVLKDIYTERDGDSHKTAKGKKFSVRTVKAPGFGPKGIHRFVLPFTVFLKLKDIG GNILPTYNEEFIDVPMAPGQASAYQSLASKLTAELRQALARRDTTLLGVVLNVLLAWPDCCFRSEIVKHPRTRGTLAFVP AIFNEEQLMPKEQALLSLCIEEKAKGRKVLAYTVYSGTRDTTCRLKKVLEQAGLKVAVLRASVDTSRREDWILDQVDRGI DVLITNPELVKTGLDLLDFPTIVFLQTGYNVYTLQQAARRSWRIGQKHPVRVIFLGYAGSSQITCLQLMAKKIAVAQSTS GDVPESGLDSLNQDGDSVEMALARQLIAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 91 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 90 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 86 |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 73 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 71 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 3e-180 | 52 |
