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Name : pilV (PFL_4682) Accession : YP_261765.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilV Function : - COG functional category : - COG ID : - EC number : - Position : 5408742 - 5409953 bp Length : 1212 bp Strand : + Note : identified by similarity to GB:ABJ13849.1; match to protein family HMM PF04917 DNA sequence : ATGACCAGTAGTAAACGCAAACAAGCAGGGATGCTGACTATTGATGCGGTAATGGCGCTGATGGTGTTAGCGGTGCTGAC AACACTTGCGACAGGTTTGATCATCAGGCAGCTGGATTCACAAGACTATGAAATTGCTGCAAACAAGCAGAAGACCATCG CCGAAGCCCTCAGCAAATACGTCAAAGACAACTACAGCACCGTCCTTGCCAATGCGACGGCGACAGCCCCGGTTCAAATC ACCGTCCCGATGCTCATCAATACAAAATATTTGCCTGCAGGCTTCGCTGATTCAAATAGCTTCGGCCAGATCATTGTCGG GCTGGCTCGCAAGCCAAATCCCAATCAGCTGGAAGTCATCGCGCTATCAACAGGCGGCCAAGCAATACCTGAGCTCGGTA TCCGGAGCATAGCGGAACACTTGGGCGGCCCTGGAGGATTCATATCCACGACCTCGCCGAATGTCATTCAAGGCGTGCGC GGCGGGTGGCAACTCGCATTGAGCAATTACGCCATCAATCCTGGACCAGGCCATACCGCAAGCGCTCTATTTCTGATGGA TGGAGACCTGGCCAACGACTATCTGTACCGAAACGCGGTGCCCAACCGGCCTGAGTTGAACAGGATGAACACCCATATCG ACATGGGCGAGAACGACATCAACAACACAGGCACGTTGAATGCGAGCACGGCGAACGTGACGGGAGAAACCTACACGGGG GGCTGGTTCAGAACCAGGGGGGATACAGGCTGGTACAGCGAGAAATGGGGAGGCGGCATCTACCAATCAGACGCTGACTA CGTGCGCATTTTCAACGACAAGGGACTCGCTACTGGAGGAGAAGTAGCCGCCGGCAAGGTCACCTCCTCGAGCACAATCA CTGCGAGTGGACGGCTAGCCACGAAAGAGTACCTATCGATCGGAGGGCTCGCTAGCGAAGGTACCGCCTGCAACGATAAC AAGCTCATCGCCAAGAATAGTGCAGGCCTCACACTTTCGTGCCAAGGCGGCATGTGGCAGAAGGCAGTGGTCACGTCAAA TTTAAAGGGAACGTTCGTCGTAGGGACGTTCAACAATGGGTGCAGGCAACCAAACCCTTTCACCGGCAGTTGTAGCTGTC CCTCTGGATCAAATGGGTACCTTGCAGGGCAATCATTCCAATACAGCCAGTGGGACGCCACCATTCTTATTTGCTATGAA GTAAATCAATAG Protein sequence : MTSSKRKQAGMLTIDAVMALMVLAVLTTLATGLIIRQLDSQDYEIAANKQKTIAEALSKYVKDNYSTVLANATATAPVQI TVPMLINTKYLPAGFADSNSFGQIIVGLARKPNPNQLEVIALSTGGQAIPELGIRSIAEHLGGPGGFISTTSPNVIQGVR GGWQLALSNYAINPGPGHTASALFLMDGDLANDYLYRNAVPNRPELNRMNTHIDMGENDINNTGTLNASTANVTGETYTG GWFRTRGDTGWYSEKWGGGIYQSDADYVRIFNDKGLATGGEVAAGKVTSSSTITASGRLATKEYLSIGGLASEGTACNDN KLIAKNSAGLTLSCQGGMWQKAVVTSNLKGTFVVGTFNNGCRQPNPFTGSCSCPSGSNGYLAGQSFQYSQWDATILICYE VNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilV2 | AAP84203.1 | PilV2 | Virulence | PAPI-1 | Protein | 6e-72 | 54 |
| unnamed | ABR13422.1 | putative PilV | Not tested | PAGI-5 | Protein | 2e-72 | 50 |
