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Name : PFL_4681 (PFL_4681) Accession : YP_261764.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : twitching motility protein Function : - COG functional category : N : Cell motility COG ID : COG2805 EC number : - Position : 5407811 - 5408752 bp Length : 942 bp Strand : + Note : identified by match to protein family HMM PF00437 DNA sequence : ATGAGCACGATCTCTGAAGCCACCTTCGTCGATCTCTATCTAGGAGATGGCTTCGCCGACGTGAAAGGACTCCCTGACCA CCCTCCTCGAGCACCCGCTCCAGGAAAGTGGTTCGAGGAGATCCAGGTGCTACGTGAGCGATGCCAGGAACACTACACCG CAACTCAGGAACCAGAATTCTCGTTGATCCATGAGGGGGTTGTGTTCCGTGTTACGCAGCTATCGGACCTCAACAACAAG TCGCTCTTTGTGCTGAGCAAATCAGCCGTAAAAATCCTTCCGCTCGACGATCTGGGGCTCTCCGATGAGCTCCACGATGC CCTCCTCAGCCAAGCGCTTAGGGGGCTCATTTTCATCTGCGGGGAGATGGGATCAGGCAAGACTTCCAGTGCCGCCTCCC TCGTCAAGGCCCGGCTCGAAAAATGGGGTGGTATGGCTCTCACGATTGAGGACCCTCCTGAACCGCTGCTGCACGGCGTG CATGGTGAAGGTCGGTGCGTGCAGGTTCCGGTTTCACGCCGCCACGGAGGTTATGAGGAGGCACTCATCCGGGCCCTTCG CACCAGGGCCGAGATGATTCTTGTCGGCGAGGTTCGAGACACCCCTACTGCAGCACAAGTAGTGCAGGCATCCATCAACG GTCACTTCATCATTTGCACCGGACATTCAGGGAGTGTGATGCAGGGGATAGAGCGTCTCGCCGTGCTGGCTCAGCCTGTG CTGCCGAACGCACTCCAAATACTTGCTCAAGGGCTCATCGCCGTCATTCATCAAACGCTGCTGAACGACGGCAGTGGATT CAAACGTCTCAAGCTGCAGTGCCTCTCCTTGGCTTCAAGCGAAAGTAACGGGATTAGAGAAAAGATCCGATCAGACAAGA TGCAGCTGCTCGAGCAAGACATAGCGAGCCAGGCCGCGAGGAGCCTCTGGAATGACCAGTAG Protein sequence : MSTISEATFVDLYLGDGFADVKGLPDHPPRAPAPGKWFEEIQVLRERCQEHYTATQEPEFSLIHEGVVFRVTQLSDLNNK SLFVLSKSAVKILPLDDLGLSDELHDALLSQALRGLIFICGEMGSGKTSSAASLVKARLEKWGGMALTIEDPPEPLLHGV HGEGRCVQVPVSRRHGGYEEALIRALRTRAEMILVGEVRDTPTAAQVVQASINGHFIICTGHSGSVMQGIERLAVLAQPV LPNALQILAQGLIAVIHQTLLNDGSGFKRLKLQCLSLASSESNGIREKIRSDKMQLLEQDIASQAARSLWNDQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilU | CAI36065.1 | PilU ATPase | Not tested | PPHGI-1 | Protein | 1e-80 | 52 |
| unnamed | ABR13423.1 | putative PilU | Not tested | PAGI-5 | Protein | 1e-61 | 46 |
| pilT2 | AAP84204.1 | PilT2 | Virulence | PAPI-1 | Protein | 4e-62 | 46 |
