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Name : pilS (PFL_4680) Accession : YP_261763.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Virulence Product : type IV pilus biogenesis protein PilS Function : - COG functional category : - COG ID : - EC number : - Position : 5407275 - 5407790 bp Length : 516 bp Strand : + Note : identified by similarity to GB:AAL05523.1; match to protein family HMM PF08805 DNA sequence : ATGGCTATTCGTTCCCCGAAAAAACAAGGTGGTTTTCTTTCGATTGACGGCGTTTTCTGGCTCATGCTGATCGCCGTCGC ACTCGGCTTCATTCTGGTAATCGCCTGGTCAATGCTCGGCAACTCAGACACAGCGATCGAGCAGAGCAACATCAGCACCA TGGTCGCGAACACTAAAAAACTCAAAGGCTCAGCCGGCTATGGGGCGTCCGGAGCCAATATGGTTCCATCCCTCATCAAC CTCGAGGGCACCGGTACCATGGGCAAGAATGGCAACACCCTGGTCAACCAGTGGAACGGATCTGTGACCGTCGTGAGCAA CGGTATGACCTTCACCATCACCGAATCCAACCTGCCGAAGAGCGCTTGCATCGTGCTTGCCACAAAGGTCGCAAAAGACC AGAAGACCACGACGGCAATCAACGGAGGTTCTGCCACTACCGGTGAGATCCTCGGGATGACTGCTTCAACTAGCTGCTCG AGCGACACCAATACCATTGCCTGGACCTTCTTCTAA Protein sequence : MAIRSPKKQGGFLSIDGVFWLMLIAVALGFILVIAWSMLGNSDTAIEQSNISTMVANTKKLKGSAGYGASGANMVPSLIN LEGTGTMGKNGNTLVNQWNGSVTVVSNGMTFTITESNLPKSACIVLATKVAKDQKTTTAINGGSATTGEILGMTASTSCS SDTNTIAWTFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilS | CAI36064.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 1e-38 | 47 |
| pilS2 | AAP84205.1 | PilS2 | Virulence | PAPI-1 | Protein | 7e-27 | 47 |
| unnamed | ABR13424.1 | putative PilS2 | Not tested | PAGI-5 | Protein | 5e-27 | 47 |
