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Name : pilO_1 (PFL_4677) Accession : YP_261760.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : type IV pilus biogenesis protein PilO Function : - COG functional category : - COG ID : - EC number : - Position : 5402711 - 5404045 bp Length : 1335 bp Strand : + Note : identified by similarity to GB:ABJ13843.1 DNA sequence : ATGAGCTCAGAAGCCCTTACTCCCAAAAATGCCCGATCCCGAGTGCAGTTGCTGACACACGGCGGCCACACATTCGTGAC AGGGCTCCGCTGGCAGCCATTAGATAGCGTCACCGGCTACATGAAAGAAGCTCGCCAATTCGGCAAAGCGAATCAGCTGG ACATTGTCACGATTCGAAGAACTCCGCGGATCATTCAAGCCGGTTTCGTTTCACGGAACGATGGTGTGACGAAAGGGATG TACTCGCTGGCCTCCACCTTGGCAGGCCAGCTGGGCGAGTCATGGGTCGCAGCTTGGCGCGTTTCCGGCGAGGAAGATCG TTTCGCTGTCGTCGCAGTGCATGACGGAGGGGTGATTCCCGGTTGCGACGTCATGGGTACTGAGGCGGACATTCGCAAAC GAGTCTCACAGCAACGCAGCCGTGGAATCGAATTCGAAGCCTGGTATTTGCCAGTAGAGTTCGGTATGGGTGGTACTCCT ATAGACGTCGAGGAGTTGCTACAGCCGTCAAAGCTAAAGCGTGAGTATCGCCTCCGGCCATTGGTATTCGGCCTCTCCAA AGCAGAGATCGTGCAGTTGAGCATTATCAGCCTACTGATAGGGGGAGCATTCATCGGCTGGTTGCAGTGGAATGCTCACA AGCAAAGGCTCGCTCAAGAAGCATTGATCGAAGCAGAAAAGCGTCGACTGGCAGATCTGGAGAAACTTCAAGCCGAAACC GGAACGCAGCAGCCAGCTCAGGCCCTAGATCACCCCTGGGCAAAGCTACCGTCCGTCACAACGTTCATCCAGGGTTGCAG CGAGGTGCTGTACCAACTGCCGTTGAACATCTCCGGCTGGTCGTTCGCTGATGCCCAGTGCGATGGGAGTCAAGTCCTAG CATCTTACAAACGGACGGGTAACAGCACTGCTGCAGAACTGATCAATGCAAGCAAAGGGTACTTCTCTGATCGCCCCACG TTCTTTGATGAAGGTAACTCAGCCACCCTCCAGTTCAGCCTTTCACTTCCAGCTGCAGGCGATGAGCCTCTGATCGACGC CATCGAGGTTCTAGCCGACCTCTCAAGCTGGTTACATCGCTTCTCACAAGATCCAAAGCTGAAAGAGGTGCCTGTCGTGG TACCCCAACAGCCAGCGCTTCCAGGACAGCCTGCTCCACCTCCTCCGCCACCTCCCCAGTGGAAGCAGTTTCAGCTCGAT GTAGTTAGCGGTGTCCTTCCATACGACTCATTCGGGGAAGCGCCTAGCCAGGGGCTACGGCTGCGCGAAATCAAGACGGA ATACAAAGCTGGCCACCTCATGTGGTCTGTCAAAGGAGATCTCTATGCGAAATGA Protein sequence : MSSEALTPKNARSRVQLLTHGGHTFVTGLRWQPLDSVTGYMKEARQFGKANQLDIVTIRRTPRIIQAGFVSRNDGVTKGM YSLASTLAGQLGESWVAAWRVSGEEDRFAVVAVHDGGVIPGCDVMGTEADIRKRVSQQRSRGIEFEAWYLPVEFGMGGTP IDVEELLQPSKLKREYRLRPLVFGLSKAEIVQLSIISLLIGGAFIGWLQWNAHKQRLAQEALIEAEKRRLADLEKLQAET GTQQPAQALDHPWAKLPSVTTFIQGCSEVLYQLPLNISGWSFADAQCDGSQVLASYKRTGNSTAAELINASKGYFSDRPT FFDEGNSATLQFSLSLPAAGDEPLIDAIEVLADLSSWLHRFSQDPKLKEVPVVVPQQPALPGQPAPPPPPPPQWKQFQLD VVSGVLPYDSFGEAPSQGLRLREIKTEYKAGHLMWSVKGDLYAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilO | CAI36060.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 4e-94 | 52 |
