Gene Information

Name : pilL (PFL_4675)
Accession : YP_261758.1
Strain : Pseudomonas protegens Pf-5
Genome accession: NC_004129
Putative virulence/resistance : Virulence
Product : type IV pilus biogenesis protein PilL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5399717 - 5400862 bp
Length : 1146 bp
Strand : +
Note : identified by similarity to GB:AAP84211.1; match to protein family HMM TIGR03748

DNA sequence :
ATGATCAGGCAGTTGACCACTCTCTCGCTTGTCGCACTCATCGCAGGCTGTGCGAGCCAAAAGGCTGAATCACCCAAGCC
GACATCCGCGTTCGATAGCAGTCGCAATCCTGAGTGGCTGTCTCCGGACCTGTATCCCAATGGTGCTGTTCCAGCGAAAG
AACCCGTTGTTCGGTACGGCCGCTACACCCTGGTCAGTACCGAACCTGGTTCCAGCCAACGGGACCTCATGGCCCAGATC
ATCGACGTGACTATCCCCTCAGGGATGAGCCCAAGCATTCGAGATGCCATGCTCTACGTCGTGGACCGGTCGGGTTACAC
GCTCTGCTCACCGAGCACGCCTCACGTCAACATCCTGTACACCCGCCCTCTTCCAGCGGCCCAGTACAAGCTTGGGCCTA
TGACGTTGCGCAACACGCTGCAGGTTCTGGCCGGCCCTGCCTGGCAGGTTAAAGTCGATGAGGTGAATCGGCAGGTCTGC
TTTGTACTGCGCCCGGGATACCAGCTACCAGATCCGGTCGCCTCATCTGCGCAGCTCTATGCCGCTAAGTCGCCGACCAC
ACTGCCACCGGCGCCTCCATCTGCTGACAAGGCCAGTACCGTTGTTGTAACCGCCGTGCCTTCCGCCTCGGCAATCACAG
CTGTAACGCCAGCGGGTGTGCAGGAATCATCCGCCACCACCCAAACGCTTTCCCCAGTGGTACCCGCCAAGGACGGCCCT
ACTATCCATAAAGCGGTGCCCAGCGTGGCTCCGAGCTCCAGTGCTGTACCAATTACGTCACTCGCCAGTTCCTCTGCAGA
GGCTTCGAAGAAGGCCGTACCTGCAGTTACCACTGCGCCTCAAAAGTCCCCCATCCCAAACCCGACGCCCGTGCCTGCGA
AGCCTCTGCCGGAGATCTGGGCGGCCAGTACCGGATCAACTCTTCGCCAGAGCGTTGAGGCCTGGGCACAGAAGGCTAAC
TGGACGTTGCTGTGGGAGCCGGAGGACCTGGACTACCCAATTGCTGCTCCATTGCGCTTTGAAGGCTCGTTCGAAGAAGC
AATCAAGCAGGTGTTCCCCCTCTACGACAAAGCGCCGCGCTCATTCGTAGTCGATGGCAGCGCTGCACAGCGGCTCATAC
ATATCGCTGAGAGAAAGAAAAAATGA

Protein sequence :
MIRQLTTLSLVALIAGCASQKAESPKPTSAFDSSRNPEWLSPDLYPNGAVPAKEPVVRYGRYTLVSTEPGSSQRDLMAQI
IDVTIPSGMSPSIRDAMLYVVDRSGYTLCSPSTPHVNILYTRPLPAAQYKLGPMTLRNTLQVLAGPAWQVKVDEVNRQVC
FVLRPGYQLPDPVASSAQLYAAKSPTTLPPAPPSADKASTVVVTAVPSASAITAVTPAGVQESSATTQTLSPVVPAKDGP
TIHKAVPSVAPSSSAVPITSLASSSAEASKKAVPAVTTAPQKSPIPNPTPVPAKPLPEIWAASTGSTLRQSVEAWAQKAN
WTLLWEPEDLDYPIAAPLRFEGSFEEAIKQVFPLYDKAPRSFVVDGSAAQRLIHIAERKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13432.1 putative PilL Not tested PAGI-5 Protein 3e-85 54
pilL2 AAP84211.1 PilL2 Virulence PAPI-1 Protein 6e-88 54
pilL CAI36058.1 type IV pilus protein Not tested PPHGI-1 Protein 4e-76 53