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Name : PFL_4666 (PFL_4666) Accession : YP_261749.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 5386147 - 5387820 bp Length : 1674 bp Strand : + Note : identified by match to protein family HMM TIGR03764 DNA sequence : GTGACAGATCTAAAAGCACGACTATTGGCCCCGGGCTTCTCCCCTTCTGCTGCTACAACGGTCCTCAGCGATCCTTTAGC CGATACGCCAATCGTGGCTACCATAGATGAGGTACTGCCTTGGGAGGACAACCCAAGGACGACCCGTAACCCAAAGTATG ACGAGATCAAGGAGTCGATCCGTAATCGTGGGCTGGACACACCTCCACCCGTAACTCGTCGACCAGGTGAGGAGAAGTAT CGGATCCGCAACGGCGGTAATACGCGCATCTCAATTCTGAAAGAGCTCTACCAGGAAACCGGTGATGAGCAGTATTACCG GATCAATCTGCTATTCAAGCCTTGGGACCAGGCTCGAGGTGAGATCGTCATGCTCACGGGCCATTTGGCCGAGGACCTCA AGGGCGAGCTCAAATTCATCGAACGTGCAGTTGGGGTAGGCCGGGCTAAAGCTCTGTACGAATCAGAAACAGGGGAGTCT ATTGGGGTCCGGGAGTTGGCTCGTCGGTTGACGAAGGATGGATATCCGATTTCACACTCTCACATCAGCAGGATGCTGGA TACTATTCAGCACCTATTACCTTGCGTTCCCAACCTACTCTATTCCGGCCTTGGTTATGACCGTATAACCAAGATCCTCG CCTTGAGAAAAACATCTTCGCTCTGCTGGAACAAGCACTACATAGGCGTTGGTGTTGACTTTGAGATGTTGTTCCAAGAT GTATTGGCTCAGTTTGACGGGGAGGTAGAAGAGTTTCTGTATCAGCGCTTCCAGGATGAACTCATTGGGACAATGAAAAA GTCCCTCCCGCTGGGCTATGAGGACATCCTGTTAGAAATCACTCAAGAACAAGATCAACTAAGACGCTCTACCCCAGTTG TTCAACTGCCAACCAACAACCACGTGCCAGCCGCTGTCCCTCTGCAGTCGGCGCCGAGCGAGAAACCAGCACCCTCACCT CAAGGTTCCACGGCTCCAGGAAACAATCAACCCTCTCGCCCAAATACCAGCCAGTCGAGTTCTGGTCCAAACGAACCGTC TCCTTCACCCGAGGAGATGCAGGCTCGTATAGATGGACATATCGCCTCGCCCGTTACCCAGACGGCTCGAGTTATCGAGA TGAAAAAGAAGCTGGCTGCAATCGAAGGTGAGCAGTTGCCCGACTTCAACTCCAACTGCCTTCAATCGATTCCAGTGCAA GCAGGTGGGCTCAATCCAATCAGTGACCTCTGGTACATCGAACGCGAGATTGATTCGTCGGAGCAACTCAGAAAACACAT CGCTCAGCTCGCTTTGGAAATTCAAGAGTCGGTGAATGCTCCAGGACAAATTATCGAAATTCCAGCCGGCATTGGATATT CCTACAGGCAGCCAACTGAGGAGTCTGAAGACACTGCCACAGCTGTGCACACCATGACGCTCCTCCAGTCGTTAAGCGGG GCAGTTGCAATCGCCTTGCAAATGATCAGGGAGAGTCCTGATGCGGACTTGAGCTCGTTGAAAGACTTTGAGTTTGCAGC TGGCCTGGGCCAACTGCTCATCGGTCAACCTTCAACAAAAGATCTTGAGCCTAACGATCAAGGTCGCATTAGCGACGGCG CTTTAGTGAAGCTTTTCAGAATCATCCGACTTGCACGCCGATTGATCGACATCGAGATCAAGCAGTCCGCGTAG Protein sequence : MTDLKARLLAPGFSPSAATTVLSDPLADTPIVATIDEVLPWEDNPRTTRNPKYDEIKESIRNRGLDTPPPVTRRPGEEKY RIRNGGNTRISILKELYQETGDEQYYRINLLFKPWDQARGEIVMLTGHLAEDLKGELKFIERAVGVGRAKALYESETGES IGVRELARRLTKDGYPISHSHISRMLDTIQHLLPCVPNLLYSGLGYDRITKILALRKTSSLCWNKHYIGVGVDFEMLFQD VLAQFDGEVEEFLYQRFQDELIGTMKKSLPLGYEDILLEITQEQDQLRRSTPVVQLPTNNHVPAAVPLQSAPSEKPAPSP QGSTAPGNNQPSRPNTSQSSSGPNEPSPSPEEMQARIDGHIASPVTQTARVIEMKKKLAAIEGEQLPDFNSNCLQSIPVQ AGGLNPISDLWYIEREIDSSEQLRKHIAQLALEIQESVNAPGQIIEIPAGIGYSYRQPTEESEDTATAVHTMTLLQSLSG AVAIALQMIRESPDADLSSLKDFEFAAGLGQLLIGQPSTKDLEPNDQGRISDGALVKLFRIIRLARRLIDIEIKQSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13448.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-144 | 56 |
| RL102 | AAP84227.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-147 | 56 |
| pph07 | CAI36048.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 7e-124 | 49 |
| ORF SG102 | AAN62323.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 7e-101 | 46 |
| ORF C107 | AAN62200.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 8e-95 | 41 |
