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Name : ndpA_2 (PFL_4665) Accession : YP_261748.2 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : nucleoid-associated protein NdpA Function : - COG functional category : R : General function prediction only COG ID : COG3081 EC number : - Position : 5384800 - 5385801 bp Length : 1002 bp Strand : + Note : identified by match to protein family HMM PF04245 DNA sequence : ATGCCAATTCGTCACCTCATTATCCATCACATCGACAAGCAGCCTGACGGTACCCCAGCTGCTCTGCACAGTCGTGACTC AGAACTGGCAGAGTCCGCCGTCCTCGAGAACATGCTCGTCGACCTCAACGAAAGCTATAACGCCAAGCAGGGCAAGGCCT GGGGCCTGTTCCATCCAGAGTCCGGTGCCTTTCCCCTCAGCGGCTGGCTGAAGGAGTTCTTCAACGGAGAGCTGGACTTC ACAGCCTTCAGTCACAAGGCTGTGGACCACCTGCAGAAACTGATGGAGGAGTCCAACCTGTCGGTGGGCGGTCACGTGAT GTTCGCCCACTACCAACAGGGCATGATCGACTACCTGGCAATCGCCCTACTGCACCACAGCGAAGGCGTGGCGGTGACCG ACCAACTGGACGTGACGCCCTCCCGTCACCTGGATTTAGGTCAATTGCAGTTGGCGGCGCGGATCAACGTCTCCGAGTGG CAGAACAACAAGCAGTCCAAGCAGTACATTTCGTTCATCAAGGGCAAGAACGGCAGAAAGTCCACGGAATACTTCCGCGA CTTCATCGGTTGCCAGGAAGGCGTTGATGGTCCGGGCGAGACACGCACCCTGCTCAAGGCCTTCAGCGACTTCGTCGAAA GCGAAGACCTGCCCGAAGACTCGGCGCGAGAGAAGACCAAGGCCCTGGTGGACTACGCCAGCAGCCAGGCCAAGCTCGGC GAACCGGTAGGCCTGGAAGAACTGTCGGAGTTGATCGACGAAGACCGGCCGAAGGCGTTCTACGAACATATCCGAAACAA GGACTATGGCCTGTCCCCGGAATTCCCGACAGACAAGCGCACCCTCAACCAGTTCCGCCGCTTCACCGGCCGCGCCGAGG GCCTGTCCATCACTTTCGAAGCTCACCTTCTAGACACGAATGTGATCTACGACGCCGATAGCGGCGCGTTGACTATCAAA AATCTTCCTACCCAGCTCGTCGATCAGCTCAAGCGCCGTTGA Protein sequence : MPIRHLIIHHIDKQPDGTPAALHSRDSELAESAVLENMLVDLNESYNAKQGKAWGLFHPESGAFPLSGWLKEFFNGELDF TAFSHKAVDHLQKLMEESNLSVGGHVMFAHYQQGMIDYLAIALLHHSEGVAVTDQLDVTPSRHLDLGQLQLAARINVSEW QNNKQSKQYISFIKGKNGRKSTEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKALVDYASSQAKLG EPVGLEELSELIDEDRPKAFYEHIRNKDYGLSPEFPTDKRTLNQFRRFTGRAEGLSITFEAHLLDTNVIYDADSGALTIK NLPTQLVDQLKRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RL104 | AAP84229.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-126 | 74 |
