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Name : argF_1 (PFL_4636) Accession : YP_261720.1 Strain : Pseudomonas protegens Pf-5 Genome accession: NC_004129 Putative virulence/resistance : Unknown Product : ornithine carbamoyltransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0078 EC number : 2.1.3.3 Position : 5350854 - 5351864 bp Length : 1011 bp Strand : + Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658 DNA sequence : ATGGCTTTCAACATCCACAACCGTAACCTGCTGAGCCTGGAACACCACACCCCACGTGAGCTGCGCTACCTGCTGGACCT GTCCCGCGACCTCAAGCGCGCCAAGTACACCGGCACCGAGCAGCAGCACCTCAAGGGCAACAACATCGCCCTGATCTTCG AAAAGACCTCGACCCGTACCCGTTGCGCCTTCGAAGTGGCGGCCTATGACCAGGGCGCCAACGTCACCTACATCGACCCC AACTCCTCGCAGATCGGCCACAAGGAAAGCATGAAGGACACTGCCCGAGTGCTGGGGCGCATGTACGACGCCATCGAGTA CCGCGGCTTCAAGCAGGAAATCGTCGAAGAACTGGCGAAATTCGCCGGGGTTCCGGTGTTCAACGGCCTGACCGATGAAT ACCACCCGACCCAGATGATCGCCGACGTGCTGACCATGCGTGAGCACGCCGACAAGCCGATCCACGAGATCAGCTACGCC TACCTGGGCGATGCGCGCAACAACATGGGCAACTCTCTGCTGCTGGTGGGCGCCAAGCTCGGCATGGACGTGCGCATCTG CGCGCCCAAGGCCCTGTGGCCCCATGACGACCTGGTGCAGCGCTGCAAGCATTACGCAGAGGAAAGCGGTGCCCGCATCA CCCTCACCGAGGATCCGAAAGCCGCGGTCAAGGGCGTGGACTTCATTCACACCGACGTCTGGGTCTCCATGGGCGAACCG GTGGAAGCCTGGGCCGAGCGTATCGAGCAACTGCTGCCCTACCAGGTCAACGCCCAGCTGATGAAAGCCACCGGCAACCC ACGGACCAAGTTCATGCACTGCCTGCCGGCTTTCCACAACAGCGATACCAAGGTCGGCAAGCAGATCGCCGAGCAGTATC CGCACCTGGCCAACGGCATTGAAGTGACCGACGACGTGTTCGAGTCGCCCGCCTGCATCGCCTTCGAGCAAGCGGAAAAC CGCATGCACACCATCAAGGCGATCCTGGTTTCGACCCTGGCCGACCTGTAA Protein sequence : MAFNIHNRNLLSLEHHTPRELRYLLDLSRDLKRAKYTGTEQQHLKGNNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDP NSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMIADVLTMREHADKPIHEISYA YLGDARNNMGNSLLLVGAKLGMDVRICAPKALWPHDDLVQRCKHYAEESGARITLTEDPKAAVKGVDFIHTDVWVSMGEP VEAWAERIEQLLPYQVNAQLMKATGNPRTKFMHCLPAFHNSDTKVGKQIAEQYPHLANGIEVTDDVFESPACIAFEQAEN RMHTIKAILVSTLADL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0103 | NP_763658.1 | ornithine carbamoyltransferase | Not tested | SCCpbp4 | Protein | 1e-94 | 59 |
| arcB1 | YP_186044.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-91 | 59 |
| argF | YP_493760.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-91 | 59 |
| argF | NP_371693.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 1e-91 | 59 |
| argF | NP_374285.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 1e-91 | 59 |
| SAKOR_01090 | YP_008491278.1 | Ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 1e-91 | 59 |
| argF | NP_645867.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 2e-91 | 58 |
